Thermaerobacter marianensis: Tmar_0151
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Entry
Tmar_0151 CDS
T01388
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tmr
Thermaerobacter marianensis
Pathway
tmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tmar_0151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmr03021
]
Tmar_0151
03019 Messenger RNA biogenesis [BR:
tmr03019
]
Tmar_0151
Transcription machinery [BR:
tmr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Tmar_0151
Messenger RNA biogenesis [BR:
tmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Tmar_0151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
ATPase_2
OB_RNB
NACHT
Spore_III_AA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADU50276
UniProt:
E6SLK9
LinkDB
All DBs
Position
172714..175311
Genome browser
AA seq
865 aa
AA seq
DB search
MAAESTVQGTAGEADGAPAGKGHGSEVEPVSGAADAAPAAAVAAPPAPASEPGTAAGDTV
TASGEEAAPATRRGRRRTGTSGTRSTRRRTAKAAGPAPEPAQGPTSEQADDPAPTTVPSG
GTGEGDVVLSGAAETPGDGKGAGDGTDRATPAAGAAEGRAPEDRGMEGPAAEGRRPDDPS
AEDPHPEGRVPAPADEAARPGSARTPEGTANAEAAAGAGLRRTAAAATGGGVQRPAGNRG
GAQHAAAGGDAPAGVATPAAAGTGVRERAEVRDLRDGRRNGGNVAVQPGPRQGYGWRRGT
PAGPGGEGAGAGARTPAAGGAAPAGAPVRGSRRPAVPGAGGADARLPRDAREGGVQVSPA
GGAPEPAVPDERYAGPGAGAGGPGSELPVEAPAVPGTAVGEGGAVPPEPADAPEAGSSVA
EAPVAGWEPAVRSRGSQGAPGRGRHGNGRPDIREMEQMTLKELYALARDLDIPYYSSMRK
QELIFEIAKARTEKDGLLWAEGLLDIMPEGFGFLRPINYLPSKEDIYVSPSQIRRFDLRP
GDMVSGQARPPKDNERYFALLRVEAVNGVDAELARDRLHFEGLTPIFPNERLTLETPGGS
IAQRLIDLVAPIGKGQRGLIVAPPKAGKTILLKQIANGIAHNYPDVALMVVLIDERPEEV
TDMERSVRGEVLSSTFDQTPENHVKLADMVLERAKRLVEHGRDVVILLDSLTRLTRAHNL
VTPPSGRTLSGGLDPAAFYKPKRFFGAARNIEEGGSLTIIATALIDTGSKMDDVIYEEFK
GTGNMELHLDRRLAERRIFPAIDIKRSGTRREEMLLNKDEQEIMWALRRSMGDRDPADIL
EKLIDRLRKTRSNAEFIAQVKEHRA
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaatccacggtgcaggggacagccggcgaggcggacggggcgccagccggg
aaggggcacggcagcgaggtggagccggtctccggggccgcggacgcagcgcccgcggct
gccgtcgccgcgcccccggcgccggcgtcagaacccggcactgccgccggtgacaccgtg
acggcgtccggcgaagaggcggcgcccgccacccgccggggccgccggcgcacgggcacc
tcggggacccgtagcacccgccgccgtacggccaaggctgccggtcccgcaccggaaccc
gcccagggcccgacctccgagcaagccgacgatccagcccccaccacggtcccgtccgga
gggaccggcgagggcgatgtcgtcttgtccggtgcggcggagacccccggtgacgggaag
ggtgccggggacgggacggatcgggcgaccccagcggccggcgcggcggaggggcgtgca
ccggaagaccgcgggatggaggggcccgcggcggaggggcgccgccccgacgaccccagc
gccgaagacccgcatccggagggccgcgtgccggcgccggcggatgaggcggcaaggccc
ggctccgcccgcacccccgaagggacggccaacgcggaggccgccgccggggccggcctg
cgccggaccgcggccgcggcaacgggcggcggcgtccagcggcccgcagggaaccgggga
ggcgcccagcacgcggccgccggcggcgatgccccggcgggggtggcgaccccggccgcc
gccgggacgggagtccgggagcgggccgaggtccgggatctgcgggatgggcggcgcaac
ggcggcaacgtggcggtccagccggggccgcgacagggctacgggtggcggcgggggacg
ccggccggtcccggtggggaaggggccggcgccggcgcgaggacgcccgcggccggtggg
gccgcacccgccggcgcgccggttcggggcagccgccggcccgccgtgcccggcgcgggg
ggggccgacgccaggctgccgcgggacgcccgcgaaggaggggtccaggtgtcacctgca
ggaggggcccccgagccggcggtacccgacgagcggtatgccggcccgggagccggagcg
ggcggtcccggatccgagctgcccgtggaggcgccggcggtgccagggacggcggtgggg
gagggcggcgcggtgcccccggagccggcggacgcgccggaggccggttcgtccgtcgcg
gaggcgcccgtcgccgggtgggagccggccgtacggtcccgtggttcccagggggcgccg
gggcgggggcgccacggcaacggccggcccgacatccgtgagatggagcagatgaccttg
aaggaactctacgccctggcgcgcgatctcgacatcccgtactacagctccatgcgcaag
caggagctgatcttcgagatcgccaaggcgcgcacggagaaggacgggctgctgtgggcc
gagggcctgctggacatcatgcccgagggcttcggcttcctccggcccatcaactacctg
cccagcaaggaagacatctacgtttccccgtcccagatccgccggttcgacctgcgcccg
ggcgacatggtgtcgggccaggcccggccgcccaaggacaacgagcgctacttcgccctg
ttgcgggtcgaggcggtcaacggcgtcgacgccgaactggcccgggaccggctgcacttc
gagggcctgacgcccatcttccccaacgagcggctgaccctggagacgccgggcggcagc
atcgcccagcggctgatcgacctggtggcgcccatcggcaagggccagcgcggcctgatc
gtcgcgccgcccaaggcgggcaagacgatcctgctcaagcagatcgccaacggcatcgcc
cacaactatcccgacgtggccctgatggtggtgctcatcgacgagcggccggaagaggtc
accgacatggagcggtcggtgcggggcgaggtgctgagctccaccttcgaccagacgccg
gagaatcacgtcaagctggcggacatggtcttggagcgggccaagcgcctggtcgagcac
ggccgcgacgtggtgatcctgctggacagcctgacgcgcctgacccgggcccacaacctg
gtgacgccgcccagcggccgcaccctgtcgggcggtctggatccggcggccttctacaag
cccaagcggttcttcggcgcggcccggaacatcgaagagggcggcagcctgaccatcatc
gccacggccctgatcgacaccggcagcaagatggacgacgtgatctacgaggagttcaag
ggcacgggcaacatggagctgcacctggaccggcggctggcggagcggcggatcttcccc
gccatcgacatcaagcgctcgggcacccggcgggaggagatgctgctcaacaaggacgag
caggagatcatgtgggccctgcgccggtccatgggcgaccgcgacccggccgacatcctg
gagaagctcatcgaccggctgcgtaagacccgctccaacgcggagttcatcgcccaggtc
aaggaacaccgcgcctga
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