Thermaerobacter marianensis: Tmar_0784
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Entry
Tmar_0784 CDS
T01388
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tmr
Thermaerobacter marianensis
Brite
KEGG Orthology (KO) [BR:
tmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmr03400
]
Tmar_0784
Enzymes [BR:
tmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tmar_0784
DNA repair and recombination proteins [BR:
tmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Tmar_0784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ADU50899
UniProt:
E6SIJ3
LinkDB
All DBs
Position
944108..948028
Genome browser
AA seq
1306 aa
AA seq
DB search
MSLRLVLGRAGSGKTHHCLSAVAREELRTLEGPPLILLVPEQATFQMEQALLAELGRLAG
RRGFARTRVASFQRLAWWIQQEVGGGTAPPVSELGKRLILRALVTREAGRLKLFRQVADR
PGFVDRLAVTLAELAAYGVGPEDLRSRYEQMDRAQREGLLGVKLHDLALLLQAYQEYLAE
HGLEDPAYAFDRVARQIRDSRWLRDARVWVDGFTGFTTAELRVLASLMRVAQRVEVSLCL
DPDEAPWAVQGVPGPGTAPGGPSGTPGGVRPGRDPAMPVHRPAGKGPGAGEGRDESALFH
PTWVTARQLLDLARQEGVGVEPALTLTGRGRSLPRFRNPALAHLERELFQFPGRRFPGLA
DGVTLVAAPDRRAEVAAAAREMLRLAREEGYRFRDMVVIVRDLETYHDLLVSACAEHGIP
LFVDRRRPVGHHPLIELVRAALEVVAGDWPYEAVFRYLKTDLVPVPRGAVDRLENYVLAF
GIRGSLWYGKGRWTWRRHDSLEADEAPRPEQEAELEAVNGIRDEATAHLRRFFDRVKSSR
RQPVPARDLARALYALLLDLDIPAQLQRWSEEAERDGDLEAAQEHLQVWNGVSELLEQVE
ASLPEIHLTAGEFLRVLEAGMEGLRVGLIPPGLDQVVAGSVERSRHPSARAAFVLGATDD
AFPRRIEEDAIFTDREREELAAAGLDLGPPGRVRALHEQYFAYVALTRARDRLWVSYPLG
DEEGRAVAPAWLTRRMRVLLPGLEVSPADVPGPEGVATPAQAVDQLARLLACRRHRAADP
AGPAAAGAGRGTAEPWAVLYQWAVTDPDVQPRLRKALAAVAYGNHIPPLGRDLARQLYAR
MAGEAWELRTSVSRLERFAACPFQHFAAFGLGLREREVGRLDAPRLGRVYHAALSLLSRK
VWEAGIDWADLSEARLEAMVAECLQEIAPRLRGELAADSAYYEHLLRDAGRILTRTALRL
AEHARRGTFRPLAVEADFGPEAGARLPFEPWELSTGERLALRGRIDRIDGARTEAGRWLI
RVIDYKSSRRQLPLDRVYHGLSLQLPLYLLVATRAAARLGTLDAAQAGEPAQPETGTGPA
SAPTPDAAPEPAALLFFPVHDPYVDVERPLTPEEAAVRRAIKELRAEGWILDEPEAVRAH
DQREQPETLIPVGFTKGGKLQWWSKVLSAAQFEALFRHVEERVRGMAEAMLQGRAEVAPY
RFRKESPCADCAFKALCQFDPYIPGNGYRVLQAMKPAEFWDRLRQEGKLRALPRETGGTA
GGTAPVGPPAAPVGPFPAGYGSRVTGAYPGPAGEPAGEGGAPRDGA
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgtctcgtcctgggccgggccggctccggcaagacccaccattgcctgtcg
gccgtcgcccgggaagagttgcggaccctcgaagggccacctctcatcctgctggttccc
gagcaggccacctttcagatggagcaggcgctgctggccgaactgggccgcctggccgga
cggcgcgggtttgcccggacccgggtggccagtttccagcggctggcgtggtggatccag
caggaggtgggcgggggcacggccccgccggtcagcgagctgggcaagcgcctcatcctg
cgggccctggtaacccgggaagccgggcgcctcaagctcttccgccaggtcgcggaccgg
cccgggttcgtcgaccgcctggccgtcaccctggcggaactggcagcatacggcgttgga
cccgaggacttgcgttcccggtacgagcagatggatcgggcgcagcgggagggcctgctg
ggggtcaagctgcatgatctggccctgctcctccaggcgtaccaggaatacctggccgag
cacggcctggaggacccggcctacgccttcgaccgagtggcacggcagatccgggacagc
cgttggctgcgggatgcccgcgtgtgggtcgacggcttcaccggcttcacgactgccgag
ctgcgggtcctggcctcgttgatgcgggtggcccagcgggtcgaggtgagcctgtgcctg
gaccccgacgaagccccttgggcggtgcaaggggtgcccggcccggggacggcgccgggt
ggtccttcaggtactccgggaggcgtgcgtcccggccgggacccggccatgccggtacac
cggccggcagggaaggggcccggtgcgggtgagggaagggacgaatcggccctcttccac
cccacgtgggtcacggcgcggcagcttctggaccttgcccgccaggaaggggtgggcgta
gaacccgccctcacccttactgggcggggacgctccttgccccgcttccgcaaccccgcc
ctggctcatctggagcgggagctgttccagttcccgggccgtcgctttccagggctggcg
gacggcgtcaccctggtggccgcacccgaccggcgggcggaggtggccgccgcggcccgg
gagatgctccgcctggcccgggaggaggggtaccggttccgggacatggtggtcatcgtc
cgggatctggaaacctatcacgatctgctggtctccgcgtgtgcggagcacgggatcccc
ctcttcgtcgaccggcgccggcccgtggggcaccatccgctgatcgagctggtgcgggcg
gccctggaggtggtggcgggcgactggccctacgaagccgtcttccgctacctgaagacc
gacctggtaccggtgccgcggggggccgtcgaccggctggaaaactacgtgctggccttc
ggcatccgcgggtccctgtggtacggcaaggggcggtggacgtggcgccggcatgactcc
ctcgaggccgacgaggcgccgcgtcccgagcaagaggcggagctggaggccgtcaacggc
atccgggacgaggcgacggcccacctgcggcggttcttcgaccgcgtcaagtcgtcccgc
cggcagccggtgccggcccgcgacctggcccgggccctctacgccttgctcctggatctg
gacatcccggcccagctccagcggtggagcgaggaggccgagcgggacggtgacctggag
gccgcccaggaacacctgcaggtctggaatggcgtcagtgagctgctggagcaggtggag
gccagcctgccagagatccacctcacggcaggcgagttcctccgcgtcctggaggcgggg
atggaggggttgcgcgtcggcctcatcccgcccggcctggaccaggtggtggccggcagc
gtggaacgttcccgccaccccagtgcccgggccgccttcgtgctgggcgccaccgacgac
gcctttccccggcggatcgaggaggacgccatcttcaccgaccgggaacgggaggagttg
gccgccgcggggctggatctgggcccaccgggccgggtccgggcgctgcatgagcagtac
ttcgcctatgtcgccttgacccgggcccgcgaccggctgtgggtgagctaccccttggga
gacgaggagggccgggcggtggcacccgcctggctcacccggcgcatgcgggtgctccta
ccgggcctggaggtgagcccggcggacgtgccgggtccagagggggtcgcgacgccggcc
caggccgtcgaccagctggcgcggctcctggcctgccgccgccaccgggcggcggatccg
gcgggaccggcggccgccggcgccggccggggcaccgcggaaccctgggcggtcctctac
cagtgggccgtgacagacccggacgttcagccccggctccgcaaggcgctggcggccgtg
gcctacggcaaccacatcccgccactgggccgggacctggctcggcagctttacgcccgc
atggcaggcgaggcgtgggaactccgcaccagcgtcagccgcctggaacggttcgcggcc
tgtcccttccagcactttgccgccttcgggctcgggctgcgggaacgggaggtgggccgg
ctggatgccccgcggctgggccgggtctaccacgccgcgctcagcctgctgtcccggaag
gtctgggaggccggcatcgactgggcggacctgagcgaggcgcggcttgaagccatggtc
gccgagtgcctccaggagatcgccccccgcctgcgaggcgagctggccgcggattcggcc
tattacgagcacctcttacgggatgccgggcgcattctcacccgcacggccctgcggctc
gccgagcatgcccggcgcggaacgttccggcccctggcggtcgaggcggacttcgggccg
gaggccggggcccggctgccgttcgagccatgggagctgtcgacgggcgagcgcctggcc
ctgcggggccggatcgaccgcatcgacggcgcccggaccgaggcgggccgctggctgatt
cgggtcatcgactacaagagcagcaggcgccagctgcccctggaccgggtgtatcatggc
ctgtccctgcagctgccgctgtacctcctggtggcgacgcgggcggcggcacggctaggg
acgctggacgccgcccaggcgggggaaccggctcagcccgaaaccggtaccggccccgct
tccgcgccgacgccggacgcggccccagagccggcggcgctgctcttcttcccggtccac
gacccctacgtggacgtggaacggcccctgaccccggaggaggcggccgtacgccgcgcc
atcaaggaactccgcgccgaggggtggatcctggacgagccggaggccgtgcgggcccat
gaccagcgcgagcagccggaaacgttgattcccgtcggcttcaccaagggcggaaagctc
cagtggtggtcgaaggtcctcagcgccgcccagttcgaggccctgttccggcacgtggag
gagcgggtcaggggcatggcggaggccatgctccaaggccgggcggaggtggcaccgtac
cggttcaggaaggagtcgccgtgtgccgattgtgccttcaaggccctttgccagttcgat
ccctacatccccggcaacggctatcgcgtgcttcaagccatgaagccggcggaattctgg
gaccggctgcggcaagaaggcaagctaagggcactgccgcgggaaacgggcggaacggcg
ggcgggaccgcgccggttggaccacccgcggcgccggttggaccattcccggcgggatac
gggtccagggtgacgggagcataccctgggcctgccggcgagcctgcaggggaagggggt
gcgccgcgtgacggtgcctga
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