KEGG   Tremella mesenterica: TREMEDRAFT_24325
Entry
TREMEDRAFT_24325  CDS       T03139                                 
Name
(RefSeq) hypothetical protein
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
tms  Tremella mesenterica
Pathway
tms03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TREMEDRAFT_24325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tms03041]
    TREMEDRAFT_24325
   04121 Ubiquitin system [BR:tms04121]
    TREMEDRAFT_24325
Spliceosome [BR:tms03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    TREMEDRAFT_24325
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    TREMEDRAFT_24325
Ubiquitin system [BR:tms04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    TREMEDRAFT_24325
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 18491352
NCBI-ProteinID: XP_007000486
JGI: Treme1_24325
LinkDB
Position
Unknown
AA seq 671 aa
MASVNSDSLTLEETNKVRVSLGLAPIGGPVVEGEEQPVDRDEIAEANYAKRKEDEKRKKE
EKEVKERIEKARNRSALNAKLKGSTLGDTNTDDTLSAKDWIKKQKKRAKEREKELALKRQ
KEMEEADAAVYDERDLAGLKVSHAADEFEEGQDIILTLKDSRVLAGEEDELQNVNLMDEA
KLKAAKERKRKAQAAYTGLDDEEFDEGRIGRKADILGKYDEDFESGALRTEGFRLGVPLQ
EAKEEVMDVEVVGRAPDVKLKLNLDFTKDFEGSDYVKEGESSFKKPKKKKVKRSARRAED
EEDADGMEVDGQPTLSRRVVDDVPQNLVDDDDLQAALSRARREQAKKKPRRKPEDIAAQI
ASRTLDDEEIQPINGDEDGRITFDDTSEFVRNVNAESLASIVKRERATTPPSQPQETVVL
KVERPQDMGQDEDMESEDEDEALAEMAAREGLSVEEYRLKIDRQMQEMNEIKVEQEEEEV
KPLGQGLAGVLNVLKQQGTIKSLTAEDQEREKVQKQKDLWLADYRRRMAERELAKVQARG
GNKDQAQREWENRVREQQEARETLELYKSYKPDINLVYHDEFGRQMTPKEAWKSLSHKFH
GKTSGRMKTQKRLKKINEEQNQVKMSASDTPLGMTDAFARRQQKTGEAHMVLSVGNKGSV
QAGDKKPKIRR
NT seq 2016 nt   +upstreamnt  +downstreamnt
atggcttcagtcaactcggattccctcactttggaggaaactaacaaagttcgggtctca
cttggtctagcacctatcggtggacctgtggtcgaaggggaagaacaacctgttgatcgg
gatgaaattgccgaggcgaattacgctaagaggaaggaagatgagaaaaggaagaaagag
gagaaggaagtcaaggagaggatagaaaaagcacggaataggtcggccctaaacgcgaag
ttgaagggctcaactttgggtgacaccaatacggatgacacgttatcggccaaagactgg
attaagaaacaaaagaaacgcgcaaaggagagagaaaaggagttggctttgaagagacag
aaggaaatggaagaggcagatgctgcggtgtatgatgaacgcgacctagcaggccttaag
gtcagccacgctgcggacgaattcgaagaaggacaagatatcattctcactctcaaagac
tcccgggtgctggctggagaagaagacgaattacaaaatgtaaatctgatggatgaagcc
aagcttaaagccgccaaagaaagaaagcgaaaagcccaagcggcatacacgggtctggat
gatgaagaattcgatgaagggaggataggtcgtaaagcggatatcttaggtaaatacgat
gaagattttgagtcaggagctttacgaacggaggggttcagactcggtgtacctctgcaa
gaagcgaaagaggaagtcatggacgtcgaagtggttggtagagcaccagatgtgaagttg
aagttgaatttggactttaccaaggatttcgaagggtcggattatgtcaaagaaggcgag
tcaagctttaaaaagccaaagaagaagaaggtcaaaagatccgctcgacgagcagaggac
gaagaagatgcagacgggatggaagtggatggtcaaccaacattatcgagaagagtggtg
gatgatgttcctcaaaatttggtcgatgatgatgatctccaagccgccctctcgcgcgct
cgtcgagagcaggcgaagaagaagccaagaagaaaaccggaagatatcgccgctcaaatc
gcttcacgaacccttgatgacgaagaaatacaacctatcaacggcgacgaagacggtcgt
ataacatttgacgatacgtctgaatttgttcggaacgtcaatgcagaatccctagcctct
atcgtcaaacgtgaacgagcaaccactccgccttctcagccccaggaaacggtggtactc
aaagtcgaacgtcctcaggatatgggccaagatgaagatatggaatctgaagatgaagat
gaggcactggcggagatggcagcaagagaaggtttatccgttgaagaatatcgtttgaaa
atcgatcgtcaaatgcaagaaatgaacgaaatcaaagtggaacaagaggaagaagaagtt
aaacctttaggacaaggtctcgctggtgttctcaatgttttgaaacaacaaggaactata
aaatctctcactgcggaagatcaagagagggaaaaggtacaaaaacaaaaagatctttgg
ttggcagattatcgtcgacgtatggctgaaagagagctggcaaaggtacaagctagagga
ggtaataaagatcaagctcaaagagagtgggagaatagggttagagaacaacaagaagct
agagaaactttagaattgtataaaagttataaacctgatatcaatcttgtttatcatgat
gagtttggaagacagatgactcctaaggaagcttggaagagtttatcacataaattccat
ggtaaaacatcaggtcggatgaaaacacaaaaacgtttgaagaaaataaacgaagaacaa
aatcaagtaaaaatgtcagcttcggatactccattaggtatgacagatgcttttgccaga
cgacaacaaaagacaggagaagcacatatggttttatcagttggaaataagggatctgtt
caagctggtgataagaaaccgaagattagacgttaa

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