Tremella mesenterica: TREMEDRAFT_30400
Help
Entry
TREMEDRAFT_30400 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K14635
ATP-dependent DNA helicase MPH1 [EC:
5.6.2.4
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tms03400
]
TREMEDRAFT_30400
Enzymes [BR:
tms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TREMEDRAFT_30400
DNA repair and recombination proteins [BR:
tms03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
TREMEDRAFT_30400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Helicase_C_2
DUF4808
Motif
Other DBs
NCBI-GeneID:
18492106
NCBI-ProteinID:
XP_007004419
JGI:
Treme1_30400
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MSDDEFDDSFLLDDSFLQQVDSITAHAISQSTSAKPTIPTRPLPVRNGPSYKPPLRSISA
PSASSSAGPSRQRLPAQPSSDDYGDLPIPTESLMAIDSLTSRSQQRTTMPTVIPSSRLGM
NRTSSGNGSSFFQTHLNFRRENQATKGKRWDRTEFAASGRRIGAASRMKGKGKAVARGLF
EDEAGESEEEEDWEPLVPGPKPLVDPTYEPQRHLPNPASIGTYIYPTNRPKRDYQFDIVQ
ACFMDNCLVALPTGLGKTFVAGVVMLNFYRWFPTGKIVFLAPTKPLVNQQIEACQMTCGI
PSKDAAVMTGQSVSAKERTRMWEERRVFYCTPQTLDNDLKRGAVDPRDIVLAVFDEAHKA
SGSYAYTTILAYLTAHHPYFRVLALTATPGADVERVQAVVDALHISRIEIREAEAPEIRK
YMNEKKTEKHLVKMTPIIEDFRDRWAALMKPYVTKLIEKGVLTDRDLDIKRLRPFRLTAK
RMEIARNRDSGLKWCYGSLNQLERMARAMGHLLEFSLGMFHTVLVELSGGSNAEGKKVGT
KGGAGALRNNIEFQRLLRDVEIEINCIRIGKGGRTKADRHPKMAKTLELLLEHFTAAAED
AKNHGTANDTRAMVFCSFRECVLEVVDALNQHPELLKATKFVGQSQGKQDHDKGFNQKEQ
KRTIADFKEGKYNILVSTSIGEEGLDIGEVDFVVIYDMPKQSIKLLQRVGRTGRKRDGRV
HVLMSENREDANWDSAQQTHREIQEEILHSRNLELFEDVESLLPRGKFPQCVEQEMPVDP
WDPADQKSKRPLPSASNTTTRSLEDDGEKPAKKKRRGHEVPEEAYDGFKSVAQLLKENGA
KKRKGKPFQRVLSESEDESVEVNTSMVSAKSAGGKRKSNINDKSTKKKEDEESDSEEVKL
AKKRQAKQAAEEERKNKVIEASTKAALDFFATLGPVRRQSRTPSPVSPSSSQSIEMDDVS
PSTKDQDVDLRDQDSLVHGGSRLTPRTAAAAGFSQLDPVDLSFDDLNSSPPKLDINTTPS
FSDKSGFTPASNLLRKPPLSHSTSRDAMPPPPIPIKSSPFQFSPEMKGKGKLMKRNLPTS
SELPSPDDSPMVMKRKYEISSPLPLPSPELSPDIPVRSRGVRTSRGISSARSRGRGRGQR
TAVSGRGRGRVRNTEERRRKRKRKDKVPPEQLAEFLDLDVGVSDSSKASSDEPTEPSEDE
SDRLFAGKDFQPTQAPKGYNQTAVYIAGLGTQAPEHGLEFVRDGRTERIKFLEKARKPVL
LSSDDERQSENEYVLGSFVVDDEEIEYDSEFFFSSFSLLFFWCFPFFFLVFSLSLYGSNP
TFIPRSLSTSLSEFQHPTK
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgatgaatttgacgattccttcctcctcgacgactcgttcctccaacaagtc
gattccatcacagcccacgcaatctcacaatccacttccgccaaacccactatccccact
cgaccactcccggtcagaaatggtccatcttacaaaccacccttgagatctatctcggcc
ccttcagcttcgtcctccgccggtccctcccgtcaacgactacccgctcagccgtcaagc
gatgactatggtgatcttcctatacctaccgaatcgctcatggccatagactctctaacg
tcaagatcgcaacaacggactacgatgcctactgtcatcccatcttcacgtttgggtatg
aacaggacgtccagtggtaacggctcttctttcttccagactcacctgaacttccgacgg
gaaaaccaggcgaccaaaggcaagcgctgggatcgcaccgagttcgcagcgagtggacgc
agaataggtgctgcatccagaatgaaaggaaagggaaaagctgtagcaagagggttgttt
gaggatgaagcaggagagagtgaagaagaagaagattgggaacctttagtacctggtccg
aaaccattggtcgaccccacatacgagcctcaacgtcatcttcctaatcctgcttctata
gggacatacatttatcccaccaatcgaccaaagagagactatcaattcgacattgtacaa
gcttgtttcatggacaattgtcttgttgccctccccacaggactgggaaagacatttgtt
gctggtgtggtcatgctgaatttttacagatggtttcccactggcaagatcgtcttttta
gccccgacaaaacctttggtcaatcaacaaattgaagcatgtcaaatgacatgcggtata
cctagtaaagacgctgctgtcatgacgggtcaaagtgtcagtgcgaaggaacggacgaga
atgtgggaagagaggagggtgttttattgcacacctcaaactttggacaatgatctcaaa
aggggagctgttgatccaagggatattgtgcttgctgtatttgacgaagcacacaaagct
tcaggctcctacgcatataccaccatacttgcttatctcactgctcaccatccctacttc
cgagtgcttgccctcacagccacgcctggtgccgatgtagagcgtgtgcaggcggtggtc
gatgcgttgcatataagtaggatcgaaatcagagaagcggaggctccggaaatcagaaaa
tacatgaatgagaagaaaacggaaaagcatctcgtcaagatgactcccatcatcgaggac
tttcgggatcgttgggcagctcttatgaagccctacgtcacgaaacttatcgagaaggga
gttcttaccgatcgtgatcttgacatcaagcgacttcgtccgttccgactcaccgccaag
cgtatggaaatagctcgaaatagggattctggcttgaagtggtgttacgggagcctcaat
caactcgagaggatggcgcgtgctatggggcatctcttggaattctcactgggaatgttt
catactgttttagtggaactctctggcggttctaacgcggaaggaaagaaagtcgggacc
aaaggtggcgccggggcattgagaaacaacatcgagtttcagagattactccgggacgtg
gagatcgagatcaattgtatcaggataggcaagggagggcggacaaaggctgatcggcat
ccaaaaatggccaagacgctcgaactgttgttggagcacttcactgcggctgccgaagat
gcgaagaatcatgggacggcgaacgacacacgggccatggtgttttgttcttttcgggag
tgtgtgctagaagtcgtagacgcgctgaaccagcacccggagctactcaaggcgacaaag
tttgtcgggcaatcccaaggaaaacaagaccacgacaagggattcaaccagaaagagcag
aaacggacaatagcagatttcaaagaaggaaaatacaatattctcgtctcaacctccatc
ggtgaggaaggtctagatattggtgaagtggactttgtcgtcatttatgatatgccgaag
cagagtatcaaattgctacaaagagttggccgaacaggtcgaaaacgtgatggtcgggtg
catgttctcatgtcggaaaaccgtgaggatgccaattgggacagcgctcaacaaacgcat
cgcgagatccaagaagagattctccattcccgtaatcttgaattatttgaggatgtcgaa
tcattgttacctcgaggcaaatttcctcaatgtgttgaacaagaaatgcctgtcgatcct
tgggatccggcggatcaaaagtctaaacgtcccctcccgtcggcttcgaacactaccaca
aggtcgttggaagacgacggagaaaaacccgccaagaagaaaagaagaggtcatgaagtg
cctgaagaagcttatgatgggtttaagtcggtcgcacagcttttgaaagagaatggagcg
aagaaacgaaaggggaaaccatttcaacgggttttgtcagaaagtgaggacgagtcggtt
gaagtgaacacttcaatggtatctgccaaatctgcgggaggaaagaggaaatcaaatatc
aatgacaaatccaccaagaagaaggaagatgaggaaagtgattctgaagaagtcaaactg
gctaaaaagcgtcaagcaaaacaagcagcagaggaagaaaggaagaataaagtgattgaa
gcttccaccaaggccgcattggatttctttgctactttaggtcctgtccgtcgtcaaagt
cggaccccatctcccgtttcaccttcttcgtcacagtccattgaaatggacgatgtctca
ccttctaccaaagaccaagatgtcgacttacgagaccaagattctttggttcacggagga
tcgaggttgacccctcggacagctgcagcagctggtttctcacaattagacccggttgat
ctttcctttgacgatctgaattcttcacctcccaaacttgacatcaacaccaccccttca
ttcagtgataaatctgggttcacacccgcttcgaacttgttgcgtaaaccacctttatcc
cattcgacatcaagagacgctatgcctcctccgccaatcccgataaagtctagtcctttt
caattttctccagaaatgaagggaaagggaaaattaatgaagaggaatttacctacaagt
tcggaacttccttcgcctgatgattctcccatggtgatgaaaaggaaatacgagatttca
tctcctttaccacttcccagtcctgaactttcacctgatattccagtcaggtctcgtggt
gtaagaacaagtagaggtatctcttctgcccgatcacgaggtcgtggaagaggtcaacga
accgcagtttcaggaagaggaagaggaagggtaagaaatacagaagaaagaagaagaaaa
agaaaaagaaaagataaagttccacctgaacaactagctgaatttctagatttagacgta
ggagtatcagattcttctaaagcttcttcagatgaacctacagaacctagtgaagatgaa
tccgatcgtctgttcgctggaaaagatttccaacctactcaagcaccaaaagggtataat
caaactgctgtttatatagccggattaggtactcaagcacctgaacatggattggaattc
gttagggatggtagaactgaaagaatcaagtttttggaaaaagctagaaaaccagttttg
ttgagtagtgatgatgagagacaaagtgagaatgaatatgttttaggtagttttgtggtt
gatgatgaagagattgaatatgacagtgagttttttttctcttctttttcccttcttttt
ttctggtgttttcccttcttctttttggtgttttctctctctctttatggttccaatccc
acttttatccctcgatctctatctacctcgttatctgaatttcaacatccgacaaagtaa
DBGET
integrated database retrieval system
