Tremella mesenterica: TREMEDRAFT_33638
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Entry
TREMEDRAFT_33638 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
tms
Tremella mesenterica
Pathway
tms00500
Starch and sucrose metabolism
tms01100
Metabolic pathways
tms01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
TREMEDRAFT_33638
Enzymes [BR:
tms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
TREMEDRAFT_33638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-amylase
A_amylase_dom_C
hDGE_amylase
Motif
Other DBs
NCBI-GeneID:
18492485
NCBI-ProteinID:
XP_007006665
JGI:
Treme1_33638
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MFFSSFLVTFLGFLSYSLALDTASMRPRSVYQLVTDRFALPSSSSSTSCNPSDRKICGGT
WAAIEDHLDYIQQMGWDTVWISPVVQNIGGTTGEGEAYHGYWSLDVSQLNPNFGTASDLT
SLISKIHERGMYFMLDVVINHVAATSSSNFSPSSSYGAFSTSNDYHPFCWITDYSNQTQV
EDCWLGDDSVALPDLNTESDTVINYWNGWIKDMISNYSVDAVRIDTVKHVPQGFWKTFTS
SAGIANIGEVLNGDPMYVSGYQSNGNINTFNYPTYYPLVRAFNSTSGNLTELVNMTTWVN
DIFPDPTLLGVFVDNHDNPRMASYTSDTALIANAHAFPFVVDGIPYGYYGAEQGFSGGSD
PDNREPLWTSGYNTNTTLYTMFKNLNDVRRAAFNASNSFYETRMNVTQMGSNEILIVKGP
LISLLSNRGQGSSGTVTIPSGSSGWGANVQVLDAVACEIMNTDGSGNLDVKVNEGMPRVM
IVETSKGNVCSGGTSNSSTSTKSAAGRRADAGRWGQVGWTVVGTIMLVMGLCG
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctcatcatttcttgtgacatttcttggttttttatcctactccctagcactt
gatactgcttccatgcgccctcgttccgtgtatcaactggtcaccgatcgcttcgccctg
ccatcttcctcttcatcgaccagttgcaacccttccgaccgcaagatatgtggaggaacc
tgggccgctattgaagaccatctcgactacatacagcagatggggtgggacaccgtgtgg
atctctcccgtcgtgcagaatataggaggaacgacaggagaaggagaagcttatcatggt
tattggtctttggatgtttcacaactcaatccgaacttcggaaccgcttccgatctcacc
tcactcatttccaaaattcatgagagagggatgtacttcatgttggacgtcgtcatcaat
catgtcgctgctacctcttcttccaatttctctccttcttcttcatacggcgctttctcc
acttcaaacgattatcatcccttctgctggatcacagattattcaaaccaaacacaagtg
gaagattgttggttgggagatgattccgtcgccctccctgatctcaacactgaatcagac
acggtgataaactattggaatggttggatcaaagatatgatctcgaattattctgtcgat
gccgtacgtatcgataccgtcaaacatgtcccccaagggttctggaaaacgtttacctcc
tctgcaggtatagcgaacatcggtgaagttttgaacggtgatcccatgtacgtctctgga
tatcaatcaaatggaaatatcaacacattcaattatccaacttattacccacttgttcga
gctttcaactctacatccggaaaccttacagaattggtcaatatgacaacttgggtcaat
gatatcttcccagacccaactctattaggtgtctttgtggataatcacgataatcctcga
atggcttcctacacttctgacactgctctcatcgccaacgctcacgccttcccattcgtc
gtcgatggtattccatatggatattacggtgctgaacaaggtttcagtggaggtagcgat
ccggataacagggaaccattatggacatcgggatataacaccaatactactttatatacc
atgttcaagaatctcaatgatgtgagaagagcagctttcaacgcttccaactcgttttac
gagacacgtatgaatgtcacacaaatggggagtaacgagattctcattgtcaaaggtcct
ctgatttctttgttgtcgaataggggccaagggtcaagtgggactgttacgatacccagc
gggagtagtggatggggggccaacgtacaagttttagatgcggtagcttgtgagataatg
aatacggatggatcggggaatcttgatgtgaaggtgaatgaaggaatgccaagggtaatg
attgttgagacgtcaaaggggaatgtgtgtagtggagggacgagcaatagtagtacttcg
acaaagtctgctgctgggcgtagggcggatgcgggacgatggggccaagtggggtggacg
gtggtgggtacgatcatgttagttatggggctgtgtgggtga
DBGET
integrated database retrieval system