Tremella mesenterica: TREMEDRAFT_36466
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Entry
TREMEDRAFT_36466 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tms01002
]
TREMEDRAFT_36466
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tms04121
]
TREMEDRAFT_36466
Enzymes [BR:
tms01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
TREMEDRAFT_36466
Peptidases and inhibitors [BR:
tms01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
TREMEDRAFT_36466
Ubiquitin system [BR:
tms04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
TREMEDRAFT_36466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
Motif
Other DBs
NCBI-GeneID:
18492797
NCBI-ProteinID:
XP_007000824
JGI:
Treme1_36466
LinkDB
All DBs
Position
Unknown
AA seq
1317 aa
AA seq
DB search
MVDGAIDGESEGGEWVKRTEEVHLEEGYDRKQYKEQYDQLLGMCHIPSEDDETLTNVTAS
FPPPYATARTYHIIPKKLFNTLQTLALGDPASSKSPVSPSDLKIDLTELIEDIEGQEVFT
LYNDTIGSPSTRMTFKGTKTRIWQLKDGLLEQDDFIYVSAEGWGKLVEWYGPYDGPTLPR
ICASGGRILLKPSIYTVHITDFLPGMTVSNQLEGIEAKPIRITCPSFFSIETFEKFLTTV
VLDQVRMENSRAEVRCWQLDVSQISDSVSPPNTLYINPSLLPNLSAKLLNHGITQPNLTC
EEMGLVHGDVFAVELGLPMGNSIFWAVDVNEEGKAVSKSTAPLALQVPKAPPPLFSQPST
FPGFGASMSSSEAGSSTQSTGMQTRSQTSQGRSKGKGLVGLHNLGNTCFMNSAVQCLSNT
QELSQYFLSGVYRDELNPDNPLGMHGQVAEAFGGVIEALWTLSGPHASFSPRQLKSTTSR
FAPQFAGYGQHDTQEFIAFLLDGLHEDLNRIKKKPYIEKPDWKPGGGNVQLAELGKECWE
GYKQRNDSVIVDLFQGQLQSTLVCPECHKESITMDPFMYLTVPLPIAQTRQIKLLFIPRD
VEQSPINIRLLIPQNASFMQVKEKLGQLVKCSPSNLVAFDLWKGSVYAWWLDSDHNSEYK
ENDVGVFYELAVPVTASRKGVGVPVSETSTITVPVYTYRSEGGRSHRDLPSECSLQPFFI
TLNRVEATDPVAVRDAIARGYSQFVRPEMKTSLWVSPNSSHAVVPPVVEEDGTITEIHLD
GSQTRVVEVNTSSTDFSDTEMTSSVTLPPSSQGTISQASDIQTVNTQNGNSTESIRTNDS
TASLRSLASSRSLVPRGDLFQVHVADASSSDKNNGFTLFKGKAEIVPFYKQTVSAASTEW
SILEHRKKPKKNMFGRLTSGINSFVNPGYNSDDEHSPPSTPTTPLVVRPGEGIFCEWTHK
RFNEYFDTAFKPEEIIDPQIQKEAEKRKAGKNIGIEDCLDEFSKEETLGQDDLWYCPQCK
KHQAATKKLEIYKAPDILVICIKRFGNSRRLSDKLDHMVHFPIDGLDLEERIGECQVAKR
LDLSTEQAKEYGMRVDEPMIYDLYAVDNHFGGMGGGHYTAFCRNRVDGKWYNYDDTRVSP
ANEAAVQSRAAYLLFYRRRTTQPIGGISHFKAQSASASASASVNVTPLPLHHSLPSPDSS
NPPSPSPNIDPDLDDFSNPSQPPLYSPIGTPPLPSPVLSAGSDSDLETVDKESVLLSTSV
SMTRGGSMLNGPLRVTIRREEPSTFEPSSEEMTRVRDVTEDTESGGGGGKDDRMDLS
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatggggctatcgacggtgagagcgagggaggggaatgggtcaaacgaacagag
gaggttcatttggaagaaggttatgacagaaaacagtataaagaacagtatgatcaacta
ctaggtatgtgtcatatcccaagtgaagacgatgagacgctgacgaatgtaacagcctcc
tttccacctccctatgcgacggcgagaacatatcacatcataccaaagaaactcttcaac
actcttcagactctagctttaggtgatccagcttcatcaaagtcacccgtatcaccatca
gacctcaagattgacctcacagagctgatcgaggacatcgagggacaagaagttttcaca
ttatacaatgacacaatcggtagtccatctacacgaatgacgttcaagggcacgaaaacg
cgtatatggcaattgaaggatggattgttggaacaggatgatttcatctatgtttctgcg
gaaggctggggtaaattagtagaatggtatggtccatatgatggtcctactctaccacgt
atctgcgccagtggaggacgtatcttactcaaacccagcatctacaccgtccacatcaca
gacttcctacccggaatgacggtttcgaaccagctagagggcattgaagcaaaacccata
cgcatcacttgcccgagctttttcagtatcgaaactttcgaaaagttcctcaccaccgtc
gtcctcgatcaagtgcgcatggagaacagtcgagcggaagtgaggtgttggcagctcgac
gtatcgcagatcagcgactcagtgtcccctccgaataccctgtatataaatccatcgctc
ttaccgaatttatcagccaaactgctcaaccacggcatcacccagcccaacctgacatgc
gaggagatgggactcgttcatggtgacgtctttgctgtggagcttggactacccatgggg
aactcgatattctgggcggtcgatgtcaacgaggagggcaaagcggtttctaagtcgact
gcacctcttgctctacaagtccccaaagcacccccaccgttgttttctcaacccagtact
ttcccaggatttggggcttctatgtcgagttcagaagctggatcatccactcaaagcact
ggaatgcagacgcgaagtcagaccagtcaaggtcggtctaagggtaaggggttggtggga
ttgcataacctcggcaatacatgtttcatgaatagcgctgtacaatgtttatcaaatacc
caggaattatcgcaatatttcttgtctggtgtgtatagggatgaactcaaccccgacaac
cctctcggtatgcatggtcaggtagctgaggcgttcggaggtgtcattgaagctctctgg
actctttctggtccccatgcatctttcagccctcgacaactcaaatccaccacctctcga
ttcgctcctcaattcgccggatatggccaacatgacacccaagagttcatcgcgttcctt
ctcgatggtctacatgaggatctgaaccggatcaaaaagaaaccatatatcgaaaaacca
gattggaaacctggtggtggaaatgtgcagctcgcagaactgggaaaggaatgttgggag
ggatacaagcagagaaatgacagtgtcatcgttgatctgtttcagggacaacttcagagt
accctcgtgtgcccagaatgtcacaaggaatcgattacgatggatccattcatgtacctc
actgtacctttacctattgctcaaactcgtcaaattaaacttttattcattccccgagac
gtggaacaatctccgatcaacatccgtttactcataccacaaaacgcttccttcatgcaa
gtgaaagagaagctgggtcagctggttaaatgcagtccctcgaatctggtagcgttcgat
ctgtggaaaggaagtgtctacgcttggtggcttgattccgaccataattctgaatataaa
gagaatgatgttggcgtcttttacgaattggccgttccagtcactgcctcgcgtaaaggt
gtaggtgtacccgtctctgagacatccaccattactgtacctgtttacacctaccgatct
gaaggtggacgatcacatcgcgacttgccttcagaatgtagtttgcaaccttttttcatc
actctcaatagagtagaagctaccgatcctgtcgctgttcgggatgcgatcgcacgtgga
tattcacaattcgttcgaccggagatgaaaacttctctatgggtgtcaccaaattcttcc
catgcggtcgttcctccagttgtcgaagaagatggaacaataaccgaaatacatttggac
ggttcacaaactcgtgtggtagaagtgaacacttcatccactgatttttccgatactgaa
atgacatcatcagtcactctccctccatcttctcaaggaacgatctctcaagcgtcagac
atccaaacggtgaacactcaaaatgggaatagtacagaaagtattcgtaccaatgatagt
acagcctcccttcgtagtttagcttcttcacgttctctcgtaccccgtggcgatttattc
caagttcacgtggcggacgcttcatctagtgataaaaataacggatttacattattcaaa
ggtaaagccgaaattgttccattctacaaacaaacggtctctgcagcatcaacagaatgg
tctatattggaacatcgtaaaaaaccaaagaaaaatatgtttggtagattgacttctggt
ataaattctttcgttaatccaggttataattcagatgatgaacattctccaccttcaaca
cctacaacacctttggtggtaagacccggagaagggattttctgtgaatggacacataaa
cgattcaacgaatattttgatactgcttttaaacctgaagaaatcatcgatcctcaaatt
caaaaagaagcggaaaagagaaaggctggtaagaatataggtatagaagattgtcttgat
gaatttagtaaagaggaaactttaggtcaagatgatttatggtattgtcctcaatgtaag
aaacatcaagctgccacgaagaaattagagatttataaagctccggatattttggttatt
tgtataaagaggtttggtaattcgaggagattatcagataagctcgatcatatggttcat
tttcctattgacggacttgatctggaagaacgtatcggggaatgtcaggtggccaagcga
ctggacctttctacagaacaggcgaaagagtatggaatgcgtgtggatgagccgatgata
tatgatctttacgccgtggacaaccatttcggagggatgggcggtggacattataccgct
ttttgtaggaacagggtggatgggaagtggtataattatgatgatacgagggtgtctcca
gcgaacgaagctgcggttcaatctcgagccgcctacctcttattctaccgacgtcgtacc
acccaacccatcggtggtatctcccactttaaagctcaatccgcatcagcatcagcatcc
gcctctgtcaacgtgactcctctccctcttcaccattccctcccttcacccgattcttcc
aacccaccatccccaagccctaatatcgatccggacctagacgacttttccaatccctct
caacctcctttatattcacctatcggaacacccccattacccagtcctgtcctcagtgct
ggatccgattctgatcttgagactgtggacaaagaatcagtcttgttatctacctctgtc
tctatgacaagaggtggaagtatgttgaatggacctcttagggtcactatcagacgggaa
gaaccttctacctttgaaccgtcaagtgaggagatgacgagggtcagggatgttacggag
gatacggaaagtggaggaggtgggggaaaagatgataggatggatttgagttga
DBGET
integrated database retrieval system
