Tremella mesenterica: TREMEDRAFT_39110
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Entry
TREMEDRAFT_39110 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
tms
Tremella mesenterica
Pathway
tms02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TREMEDRAFT_39110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tms02000
]
TREMEDRAFT_39110
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_39110
04090 CD molecules [BR:
tms04090
]
TREMEDRAFT_39110
Enzymes [BR:
tms01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
TREMEDRAFT_39110
Transporters [BR:
tms02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
TREMEDRAFT_39110
Exosome [BR:
tms04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
TREMEDRAFT_39110
CD molecules [BR:
tms04090
]
Proteins
TREMEDRAFT_39110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_22
AAA_29
AAA_5
AAA_16
AAA_18
AAA_30
Zeta_toxin
AAA_23
nSTAND3
AAA_28
RsgA_GTPase
AAA_15
DUF5906
RNA_helicase
PRK
NB-ARC
P-loop_TraG
nSTAND1
Rad17
Motif
Other DBs
NCBI-GeneID:
18493019
NCBI-ProteinID:
XP_007004506
JGI:
Treme1_39110
LinkDB
All DBs
Position
Unknown
AA seq
1528 aa
AA seq
DB search
MLEDPFEYSHGRYGSGGVSGKQKTMPGYKFANLSPPLQDEKEELIGYTADLHEVIPRPIS
EARRSLYPPSPRPVIKASILEQHPDMIPPDTPSGASKSSPSTPVRATFVTLFSLTDHRDW
IINFFPGLIIACAAGLVPPYMSLVVGEAFAVFEAYPLDLSGTSAQRAALLHGVSNTSIKL
TVAGIVGVITNYLRTVIWVRHGETHVGRLRRAVYDGVQRKGMEWFDLGMGTNETAETAAN
GETIGAGGMMSKFTKETDDVRIATSQAMGLVWTNLAVFVLCFILAMIKSPVLTLVTLSTI
PLLVLVQIIVQTVVGPVLAGERRATAEASTNIERATNAIATVKAHNAQGHESARFNKIAD
RANTSMVRLAVVWGFMFSATGFLSLSTFVVGFWYGAKLVQEHKVSNGDVMTVFWACLIGA
GYLQNVVPQLTYITRGKNSMASLLTVIQDSPSRPTSTLSSPTSPTFPIQRGSMHKKIRQT
SLRRIRPPRCRGEFNFRHVSFAYPSRPDNPVLRDVTLFVPPGETTFIVGGSGSGKSTIAQ
LLLRLYQPSGGEITLDDQDFRYLDEGFTKENIAAVQQGCILFDLSIHDNVAMGVAGSGPD
PKTSVVRRPQDVSRQEVVEACKMAMIHDFIASLPEGYETNLGTGGSQLSGGQKQRLAIAR
AKIRDPTILILDEATSALDATSRVLVFDSLQRWRKNRTTVVITHDLSQIRPDDFVYVMQD
GIVAEQGFRVDLSRKTPLHGQPLGIFASMAAEQASDPVPEKFEEYVDGSMIEEVLEDDDE
IPVRDQRFSRPRTPSFGPGLRPGSAMYLGILDDYSKGLRSSSIDPTKRDSRHLSVRPLSS
AQKRLSWSPQELDIRGSRHSLSRAGSRSSVISTRVSRQLFPSDPSTIHRLSNSDGFLQPP
IQIEKARVSLVPYDFKSRTLSQNLEDELKSSSFEVITHPSEEISNIKPKSIPSIFIVLYR
YYFTIPRKPLLLLGLLSAIAHGVTTPLWASYLSKLMQFAGVGDSSFALTKYALIVLGLAA
AQAIAIFFEEYCLYAVSGHWATELRKTAYDGVLQQDKAWFDRSENSPAVLVQSIMKDTDD
IKGLVSSVMGRFLVAVVMISVGVIWALVVQWRLTLIGVALAPVFVAVIVGNESLIRNAEV
RSKARREAVAKVFYESIANIRGIRSMTLEGVFREKFEIDSATARRGGRHDAWLVAIGTGA
TGGMILFCQALLNWAGAKLMLNGHFNYVIMLQVYNLVLFSLTFGSQMLDFIPTMSKAKVA
ASDFHRFLKLSTTVSESSGTLRYPISGNVTFSHVSFSYPTRPDVLVLQDLTFSLSPGECI
AIVGPSGCGKSTIASLLQRLYEPTSGGIKMDRFDLSQADVKWLRNHIAVVSQSANLFDAT
ISENIAYGSDVPLGEIHRAAQAANIHDFIQSLPDGYDTHLGENASLISGGQAQRLQIARA
LVRRSNVLILDECTSALDVENQRAILDTIVRIKDTRTTIFITHSLEAMKRCDKIICLGEG
RVVEQGTFEELSRKGGVFAQLMRTGEWE
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgttggaagatccgtttgaatactctcatgggaggtacggaagtggaggagttagtggg
aagcagaagaccatgcctgggtacaagttcgcaaacctttcaccacctttacaagacgaa
aaggaagagctcatcggttatactgccgatttacatgaagtcattcctcgacctatcagc
gaagctagaagatctttgtaccctccatcacccagacctgtcataaaagcctccatactc
gaacaacatcccgatatgattcccccagacacaccgtctggtgcatcaaaatcttctcct
tccactccggtcagagccacttttgtgactctcttctctcttacggatcacagagactgg
atcatcaacttctttccaggcttgatcatagcgtgtgctgccggtctggtgcctccatac
atgtcactcgtcgtgggagaagctttcgccgttttcgaagcataccccctggatttaagt
gggacttcggctcaacgcgcagcattgctgcacggagttagcaacacctctatcaagttg
actgttgccgggatcgtgggtgtcatcacgaattatctccgtacggttatctgggtccga
catggggaaactcatgttgggcggttacgacgagccgtgtatgacggcgttcagagaaag
ggtatggaatggttcgatcttggcatgggtacaaatgagactgccgaaacagctgcaaat
ggagagaccatcggtgcaggtgggatgatgtccaaatttaccaaagagacggacgatgtc
cgcattgccacctcccaggccatgggtcttgtatggaccaatttggccgtcttcgttctc
tgtttcatactcgccatgataaaatccccagtcctgacccttgtcacgctgtcaaccatc
cctctcctggtcctcgtccagatcatcgttcaaaccgttgtcggccccgtattagctgga
gaacggcgcgcgacagccgaagcatctaccaatatcgaaagagccaccaatgctatcgct
actgtcaaagctcacaatgcgcaaggacacgagtcagccagatttaacaaaatagctgac
cgagccaataccagtatggtccgtctggctgtcgtatggggtttcatgttctcagccacc
ggatttttgtcacttagcacctttgtggtaggcttttggtatggagcaaagcttgtgcaa
gaacataaagtgtcaaatggggacgttatgaccgtcttttgggcttgtctcatcggagct
ggttatctacaaaacgtcgtgcctcaactcacgtacattaccaggggtaaaaattctatg
gcctcccttttgaccgtgattcaggattctccaagtcgaccaacatccaccctttcctca
cctacatcaccgactttccccattcaacgagggtctatgcacaaaaagatacgacagacg
agcttacgcagaatccgacctccacgatgtagaggtgaattcaactttcgtcatgtttcc
ttcgcatacccttcaagacccgataatccagttttgagggacgttacattgttcgtcccg
ccaggtgagaccacgttcatcgtcggaggatcgggatcaggtaagtcgacgatcgctcaa
ctgttattgcgactttatcaaccttccggaggtgaaatcacactggacgatcaggatttt
cgataccttgatgaagggttcaccaaagagaacatcgctgctgttcaacaaggctgtatt
ctgttcgaccttagcatacacgataatgtagccatgggagtagctggatcaggtccagat
ccgaagactagcgttgtgaggagacctcaggacgtcagtcggcaagaagtcgtggaggct
tgcaagatggctatgatacatgatttcattgcatcgttgccggagggttatgagactaac
ttgggtactggaggatcacaattgagtggaggtcagaaacaacgattggcaattgcaaga
gccaagatacgggatccgaccattctcattctagatgaagcgacttctgctctagatgca
acttcccgagttttggtctttgacagccttcaacgatggcgaaagaatagaaccacagtc
gtcatcacccatgatctctcacagatacgaccagatgactttgtctacgtcatgcaagat
ggtatcgttgcagaacaagggttccgagttgatctttcacggaagactcctctccatggc
cagcctctaggaatctttgcgtctatggctgctgagcaggcttcagatcctgtcccggag
aaattcgaagaatatgtggacggctcaatgattgaagaagtcctcgaggatgatgacgaa
attcccgttagagatcaaagattttctcgtcctcgtaccccaagctttggtcctgggctt
cgacctggaagtgccatgtatcttgggatcctcgatgattactccaaaggactgagaagt
tcaagtatcgatcctaccaaacgagattcccgacatttatcagtccgaccgttgagttct
gcacaaaaacgactcagctggtcacctcaagaactagacattagaggaagtcgacatagt
ctatcgcgggcgggcagtcgttcgagtgtcatcagtactcgtgtatctcgacaactcttc
cctagtgacccatccactattcatcggctcagcaattcggatggctttttacagcctccg
attcagattgaaaaagctcgagtatcccttgtcccgtacgactttaaatcccgaaccctt
tctcagaatctggaagacgaattgaaaagttcttccttcgaagtgatcacccatccctct
gaagaaatatcaaacatcaaacccaaatccattcctagcatcttcatagtactatatcga
tattacttcactatccctcggaaacctctactgttacttgggctactatcggccatcgca
cacggtgtcaccactccattatgggcttcatatctttcgaagttgatgcaattcgcaggt
gttggcgattcttcgttcgcattgaccaaatacgctttgatcgtcttaggtctcgctgcc
gctcaggcaatcgcgattttcttcgaggagtactgtctgtacgctgtgtccggtcattgg
gccacagaactgaggaaaacagcttatgatggagtgcttcaacaggataaagcgtggttt
gatagatcagagaattccccagcggttttggtacagagtataatgaaagatacagatgac
atcaagggattagtgagctctgtcatgggcagatttctagtggcggtggtcatgatatcc
gttggggtgatttgggctttggtagtgcaatggaggttaactttgataggtgtcgctttg
gcaccggtgttcgtcgctgttattgtggggaatgagagtttgatcaggaacgcagaagtg
aggagtaaagcgaggagagaagctgttgccaaggtgttttacgagagtattgccaatatc
cgagggatcaggtctatgactcttgaaggcgtgttcagagagaaattcgagatcgactcc
gctacagcccgtcgcggaggtcgtcatgatgcttggctcgtagccatcggaacaggtgct
acaggtggaatgattctattctgtcaagcactcctcaattgggccggtgctaaactcatg
ttgaatggtcatttcaactacgtcataatgcttcaagtctacaacttagttctattctca
ctcacattcggttctcaaatgttagatttcattccaaccatgtcaaaagccaaagttgca
gcatcagactttcatcgatttctcaaactttcaacaactgtttctgaatcatctggaacc
ttacgttatccaataagtggaaacgttacattctcacatgtttctttctcttatcctact
cgtcccgacgttctcgttctacaagatctcacattctctttatctccaggagaatgtata
gctattgtcggtccttccggttgtggtaaatcgacaatcgcttctcttcttcaaagatta
tacgaaccaacatcaggtggaataaaaatggatagattcgatctttctcaagcagatgtt
aaatggttgagaaatcatattgcagttgtttctcaatcagcaaatttgttcgacgctaca
atatcggagaatatcgcttatggttcggatgtaccattgggtgagatacatagagctgca
caagcggctaatatacatgatttcattcaatctttaccggatggttatgatactcattta
ggagaaaacgcaagtttgatttctggtggacaggctcagaggttacaaattgctagagct
ttagtgagaaggtctaatgttttgatattggatgaatgtacttcggctttggatgtggag
aatcaaagagctatattggatactatcgttaggatcaaagatactcgaacaactatcttt
atcactcatagtctcgaggcgatgaagagatgtgataagattatctgtcttggagaaggc
agagtggtagaacaagggacttttgaagaattgtccaggaagggtggggtgttcgcacag
ttgatgaggacgggtgagtgggaatag
DBGET
integrated database retrieval system
