Tremella mesenterica: TREMEDRAFT_44723
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Entry
TREMEDRAFT_44723 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_44723
Membrane trafficking [BR:
tms04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
TREMEDRAFT_44723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Motif
Other DBs
NCBI-GeneID:
18493660
NCBI-ProteinID:
XP_007005710
JGI:
Treme1_44723
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MYWPTTVSRQLSIPWPTNEETIRRLRSNKKGNFFAILTETTLSVWDVRPTVLQLASIRTP
KNVSRWGNNDDVFWSHDGRGIIVLTSNSHLLFYTLVPSNLPAYTLRTDPSFPPGDGPGEG
DPLMGWQLDYRGAAFAMGSCTSLLVQTHNLMLCLRHPPAILTVPYPLPQEMLSLESDVPP
VPLDGGEGKDVQIWEFEGSGEWMRMVENSLPIPRDLHVSKVQGMQTMWIMTTTEGRVYAL
HRPYSRSTPFATPHNEDRHGSKSSATRFAGRLLYPSPRPSSETSNPSHSIAALGLLHASD
MDAEVEVTPENKALEVASNGRYGLIAVGCANGNVEIITLLPEPHPIRHSHTLDLKRSANL
RTSPGLVTCLQWTSDGFCLAVGYQHAWAVWSVSGRLAGFGAREIVEETRVGVEDTFNSGV
ADLFWAPGNLELFVRPSSDQTALYSMPFVKSATTTQHSPDNTRYAFLQMDDRVLVYRGAD
QPDMSVINPESDVWEHVKIPSDYIATNWPIRYASISSDGKFIAVAGGRGLAHYSADSRRW
EIVFEGEQEFRFVVRGGLLWFQHVLIAAVEVGKVHQIRLYSRESDATEGRVLHSATLRAP
VQVMSLLNNSLLVYTTDNTLYHFLIIPSKGNIRLYLCGSISFEGVVQVPSRVKALSWLVP
EAQSNLGDPSDDLIVATIIFLVDRKLLLLRPRRAANDEVRYDMQTLADSIECYWTHLSGV
GTLENSLWGYDGSSMRVWLDALTIEATRVDIDKDAYESVKESVSLDLDFYPLSILMDKGI
IIGVDHETSTRSLPFSLHKLETRSRLFLPPFLQYHLSTPHLPNALAFAANYQSLIYFTHS
LEILLHTVLEADLSPQNKSTLLQTTVEFLDHFTESLEVVVACARKTDPRMWEMLFDVVGK
PRDLFEKCLKAGKLDVATSYLLVLHNMEMLDDAKDAVRLLRLAMTAKEYKLCKDILRFLH
SIDETGHALRKAIGEVQLLELEPATPLNISNPRLVHPPFTPIFSPASDFDDTPGRVTLTP
AD
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtactggcccaccacggtatcccgtcaactcagtataccatggcctaccaacgaagag
actatacgacgtttgaggtcgaataagaaaggcaactttttcgccattctgactgaaacc
actttatcggtatgggatgtccgacctactgtactccagctggcatctatcagaaccccg
aagaacgtctcaagatggggaaataatgacgatgtattttggtctcatgatggaagaggt
atcattgtgcttacatctaactctcatctcctcttttacactctcgtcccctccaacctc
cccgcttatacccttcgcaccgatccctcttttcctccaggtgacggaccaggagaagga
gacccactcatgggttggcaactagattatcgaggtgcagctttcgctatgggatcatgt
acttctcttctggttcaaactcataatctcatgttatgtcttcgacatcctccggcgata
ttgactgttccttatccattacctcaggagatgttgagtttggaaagtgatgtaccacct
gttccacttgatggtggggaagggaaggatgtacaaatttgggagtttgaaggttctggg
gaatggatgaggatggttgaaaattcactacccattccacgcgacctccacgtcagcaag
gttcaaggaatgcaaaccatgtggatcatgaccacaaccgaaggaagagtgtatgcgctt
catcgcccttacagtcgctctactccattcgcgacaccccataacgaagatcgacatggt
tctaaatcatccgccacacgtttcgctggccggcttctctacccatcaccccgaccatcg
tccgaaacgtcaaatccatcgcatagcatagccgcattgggtcttttgcacgcaagtgac
atggacgccgaagtagaggtcactccggaaaacaaagccctggaggtcgccagcaacggt
cgatatggcttgatagctgtggggtgtgccaatggtaacgtcgaaatcatcaccctcctt
cctgaaccccaccccattcggcattctcatacacttgacctaaaacgatctgccaacctg
cgtacatctccaggattggtcacttgcttgcagtggacctcggatggattctgcctggca
gtgggatatcaacatgcttgggctgtctggtccgttagtggacgacttgctggtttcgga
gctcgagagattgtagaggaaactcgtgtcggtgttgaagataccttcaattccggcgtc
gcagatttgttctgggcaccgggcaacttggagttgttcgtccggccctcctcagatcaa
acggcgttatactctatgcccttcgtcaaaagtgcgaccactacccaacattcacctgat
aacacgcgatatgcctttctgcagatggacgatagggtgttggtttatcgaggtgctgat
cagcccgacatgagtgtgatcaaccccgagtcggacgtatgggagcatgtcaagatacct
agcgattacattgctacaaactggcccatacgttacgcctctatttcttccgatgggaaa
ttcattgctgtggctggtggtagaggtttggctcattattctgctgatagtcgaaggtgg
gagatcgtcttcgaaggagaacaagagtttcgcttcgtggtccgcggaggtcttctttgg
ttccagcatgttctgatagcggctgtagaggttggaaaagtgcaccagatacgtctctat
tctcgagagtccgatgctacagaaggcagggtactgcattccgctactctgagagctccc
gtacaagtcatgtcactgttaaacaactcgctgcttgtatataccacagataatactttg
tatcatttcctcatcattccttccaaaggaaacattaggctttatctttgtggaagcatc
agttttgaaggtgttgttcaagtcccaagtcgggtcaaggcgttgtcgtggttagtccca
gaggctcagagtaatcttggagatccatcggatgatcttatagttgctaccatcatcttc
ttggtggatcgcaagttgctgcttctccgacctcgacgagccgccaacgacgaggtacgg
tacgatatgcaaaccttggccgattccatcgaatgttactggacgcatctcagtggagtg
ggcacactcgagaactccctctggggatacgacggttccagcatgcgagtgtggcttgat
gctttgaccatcgaggcgactcgagtggacattgacaaggatgcttatgagagcgtgaag
gaaagtgtctcccttgatttggacttttatcccttgtctatcctcatggacaagggcatc
atcatcggtgttgaccacgaaacttccactcgatcactcccgttttctttacacaaactc
gaaactcgaagtcgtctattcttacccccttttctgcagtatcatctctccactcctcat
ttacctaacgctttggctttcgcggcaaattatcaatccctcatctactttactcattca
ctagaaatcttacttcatacggtactcgaagcggacctttcaccacaaaacaaatccacc
ttgcttcagactactgtggaattcctcgatcatttcacagaatcactagaggtcgtagtg
gcttgcgcgagaaagaccgatcctcggatgtgggaaatgttatttgatgtggtcggtaaa
cctagagatctatttgagaaatgtttgaaagcggggaaattagatgttgctacgtcgtat
ttgttggtattacacaatatggagatgttggatgatgcaaaggacgcagtcagattatta
cgtttagccatgacggccaaagagtacaagttgtgtaaagatattctcagattcttacat
tccatcgacgaaaccggtcatgcgttgaggaaagccattggagaagtccaattactcgaa
ttggaaccagctacaccgctcaacatctcgaatcccagacttgtacatccgccattcact
ccgatcttttcgcccgcttcggatttcgatgatacgccaggacgagtgaccctgacccct
gccgattga
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integrated database retrieval system
