Tremella mesenterica: TREMEDRAFT_60613
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Entry
TREMEDRAFT_60613 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K21989
calcium permeable stress-gated cation channel
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tms02000
]
TREMEDRAFT_60613
Transporters [BR:
tms02000
]
Other transporters
Pores ion channels [TC:
1
]
TREMEDRAFT_60613
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
18495130
NCBI-ProteinID:
XP_007002871
JGI:
Treme1_60613
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MGVIAFDIHDICHVAPPLTPEVFRLPTLVARSSLSAQSAVTTTSSIIPGIIPATATRAPI
SQATSTAARSSRIISASSLRSSSSTPTSSFSASLVSPTSASIQSVSTSSVARVAQAATSL
NRCAGDWDWQAWGAISALIFGAVIGGLLWLLWGLLRLRLPALYSPRTWFVDPSARPSRTW
SFTGFVLPFLHMPSLSSDGPLSAASASLPSIFTALKLTALASLLALAAGLPLISAGVPCL
SQTSPQNPLGGRLGTLTDLSLLSLLNALDPSPDSPSISSLLHLPPVRRALPSTIRPVVDS
ARARLIVLLVIIVVLAVGGGLFVIFRTYRSLARYRRHFENDICNGLDMVFISSRDAPGWL
GKSEERLKRWFRDNATVGEGDNSKDLDVIGVFAVPDTTDLRLKVAEREKALLELETSESV
YIKTHKLDIDPAQPVTEPREAVWWASGSSPARPIPPTISEPSPEENLTASPRGYHRLSTG
RRSSQLDPASPTSPRPQNLGIETRFHEINRDSAVYGGRFEIGQRIKRNEQGEWVSDPSPD
SESTNPLGSGRSAESHASPEYESPPVSDENIGPSRKSGENVRWAVGTAEGGASQNRRSEE
RSVQRSASARSIPQSSSESPLGGSVPESVLLDPGSDLLQSRKRFKDLDTEVVGLQQRTFS
ATASGAHVEGWILVGHGVRSFPHAWVIEGRTTEDILWEKLSKQSRGSLLWYWIKIGLIGA
VLSIIMVPFIALSVGTAPGFSHYLGLLRPLERIDGLGSGLAEGLAPAMALFLAVSLAIFT
TNPFKGTFYLLLWSVIWLVTVASLEYSVQGFVSHVQEGRTVGDGAIFSTWFIFVLLLDVA
IIVPAIYLLRPYQLIRYLSKRRSARTPREKFRLNLPSSFNPSYAFAPIFLAVFYANSLLF
LFPLLSIPIILLLFLSFIAIRHSSEYVNVDRTGTYAFARLLLWTLRRFGWTLAIQPLIYG
LILVSRREWAIGGVSLGCALLTIIISEIVTVGLHSHKRRTSPGVSAAIEDVSRSMVSMTA
SPEKTIQHRISDSSMLQRVAALLPGYSRLPEDCPVPLKTEWIDDIFRTEKASYASPDFSS
HHSKSSSNVHSHPHTSSPPPHASSSSPTSHTPPQSRSPTVAQDRFLYDPSESLRGLVYPP
ELVAPTPVIWLPNGRGGETQANELMRQGLVAIVDPSHQHPSRHYSESEKRISDPTGPTSL
DIHQSHLTVSRNEPRTPRRSDTRGSRSSRRRIIHEDVGEEERREREPASPAEEAVSPLLV
RT
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcatagcttttgacatccacgatatctgtcacgtcgcaccgcctttgacacct
gaagtcttccgattaccgacgctggtcgctcgctcgtctttgagcgctcaaagcgccgta
acgaccacaagtagcataattccaggtatcataccagccactgcaactcgtgctccgatc
agccaagctacctcaacagcagcacgatcgtcccgtatcatctcagcttcaagtctacgc
tcgagctcctcgacacctacctcttccttttcggcctctctagtcagcccgaccagcgcg
tcaatccagtcagtcagcaccagctcagtagccagagtagcgcaggcggctacttctcta
aatcgatgtgcgggagactgggattggcaggcatggggtgctatctcagctctcatcttt
ggagcagtcattggaggcctactatggctcctgtggggattgctacggctgcgcttgccc
gcattgtactccccacggacgtggttcgtagatcctagcgctcgtccgtctcgaacatgg
tcattcacaggctttgtgttgcctttcttgcatatgccctcgctttcctccgatggccct
ctttccgccgcttccgcctctctcccttcaatcttcactgcactcaaactcaccgcttta
gcttctctcctcgctttggcagctgggttacccttgatttccgccggcgtcccttgtcta
tctcaaacatcaccccaaaaccccctcggcggacgactgggtaccctcaccgacctttcg
ctccttagcctactcaatgctcttgatcccagtcccgactcacctagcatatcctctctc
ctccaccttcccccagtacgacgcgccttgccgtcgaccatacgaccggtcgtagattct
gcacgcgctcgactaatcgtgctgctcgtcattatcgttgtcctagcagtcggcgggggc
ctttttgtcatcttcaggacttacagatcacttgctcgctatcggagacatttcgaaaat
gacatctgcaatggactagacatggtattcatctcgtcacgcgacgctcctggatggttg
ggaaagtctgaagaaaggctcaaacggtggtttcgagacaacgcaaccgtcggagaaggt
gacaatagcaaggatctcgatgttattggggtttttgccgttcctgacactaccgatctg
cgtctcaaagtcgcggagagagagaaggccctactcgagctcgaaaccagtgaaagcgtt
tacatcaagacccataaacttgacatcgaccccgcgcaacctgtgaccgagcccagagaa
gccgtctggtgggcgtccggatcttcgcctgcccgtccgatccctccaactatctccgaa
ccgtccccagaagaaaaccttacagcgtctccaagaggatatcacaggctgtctaccgga
cgacggagctcgcagcttgaccccgcttcccccacctcccccagacctcagaaccttggc
atcgaaacccggttccacgaaatcaatcgggattctgctgtttatgggggacgtttcgag
ataggacagcgaatcaaaaggaatgaacaaggagaatgggtatcggatccttcgccagat
agcgagtcgacgaatcccttggggtcagggcggagcgcggaatcgcatgctagtccagag
tacgagagtccccccgtcagtgacgagaatatcggtccttctcggaagtctggtgaaaac
gtgcgttgggcggtgggtacggccgaaggtggtgcatctcagaatcggcggtcagaggaa
cggagcgtacaacgaagtgctagtgccagaagtataccccaatcttcatccgagagtcct
ctaggagggtctgtgcccgaatcggtcctccttgaccccgggtcggatttactgcaaagt
agaaaacggttcaaagatctcgacaccgaggtagttggcctgcagcaacgaactttctca
gctaccgcctctggggcgcatgtggagggttggattctcgttggccacggtgtgaggtcg
ttccctcatgcgtgggttatcgagggaaggactacagaggatatattgtgggagaaactg
tctaaacagtcgcgaggaagtttgctctggtactggataaagatcggtctgattggagcg
gtgctatctatcataatggtaccattcatagcattgtcggttgggacagctccaggcttc
tcacattatctgggactgttgcggcctctggagaggatcgacgggctgggttctgggctg
gcggaggggttggcgccagccatggcattatttttggctgttagtctggctatctttacc
acgaaccccttcaaaggcacattctatctcttattgtggtccgtgatctggctggtgact
gttgcctcgttggaatattctgttcaggggtttgtttcccatgttcaggaggggagaaca
gtcggtgatggggctattttctccacttggttcatattcgttttattactagatgtcgct
ataatcgttcctgccatctacctcctccgaccttatcaattaattcgatacttgtcaaaa
cgtcgttccgctcggaccccgcgtgagaaattcagattaaatcttccgtcatctttcaac
ccatcttacgcctttgctcccatcttcctcgctgtgttttatgccaattctcttctcttc
ctctttcctctactctctatcccaataattttgcttcttttcctctctttcatcgctatt
cgacactcgagtgagtatgtgaacgtagaccgtaccggaacctacgcctttgcgcgacta
ttactgtggaccctccggcgatttggctggactctcgccatccaacctctcatatacggt
ctcatacttgtctcacgccgtgaatgggccatcgggggcgtctcactcggttgtgctctt
ctcaccatcatcatttccgaaatcgtcaccgtcggacttcattcccacaaacgaagaacc
tctcctggagtttccgctgctatagaagatgtatcaaggtcaatggtttcgatgacggct
tcaccggagaaaacgatacaacataggatttccgattcatcaatgttacaacgagtcgca
gctctacttcctgggtattctagactaccggaagattgtccggtccctctgaagacggaa
tggatagatgatatctttcgcactgaaaaagcttcctatgcttctccagatttctcttca
catcattcaaaatcttcatcaaatgttcattctcaccctcatacctcttcgcctcctcca
cacgcctcgtcttcatctcctacatctcacacaccaccccaatctcgatcgcccactgtt
gcgcaggataggttcctatacgacccctcggagtcattacgaggactcgtctacccacct
gaactcgtcgctcccacaccggtgatttggttaccgaatggaagaggcggagaaactcaa
gcgaacgaattgatgagacaaggtttggtagctattgtcgatccttctcatcaacatcct
tcgagacattattctgaatcagagaaacgtatttccgatcctaccggtcccacttcactt
gacatccaccaatcacatttaactgtgtcaaggaacgagcctcgaactcctaggagaagc
gatacgagaggtagtagatcttccagacggagaatcatacacgaagatgtcggagaagaa
gagaggagggaaagagaacctgcttctccggctgaagaagcagtttcacctttactagta
cgaacttga
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integrated database retrieval system