Tremella mesenterica: TREMEDRAFT_70116
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Entry
TREMEDRAFT_70116 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tms01006
]
TREMEDRAFT_70116
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_70116
Prenyltransferases [BR:
tms01006
]
Protein prenylation
Rab geranylgeranyltransferase
TREMEDRAFT_70116
Membrane trafficking [BR:
tms04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
TREMEDRAFT_70116
Endosome - Lysosome transport
Rab GTPases and associated proteins
TREMEDRAFT_70116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDI
NAD_binding_8
FAD_oxidored
Fijivirus_P9-2
DAO
Motif
Other DBs
NCBI-GeneID:
18498255
NCBI-ProteinID:
XP_007007664
JGI:
Treme1_70116
UniProt:
R7SB59
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MSPSELESDTYDVVVIGTNLSGSIVAASLAKAGKSILHIDPNEYYGSSHSSLTLDELIQW
SSLHSSPSLTSHQYSQASTSTLTPSLHSDRRRYALSLYPAILPSRGSMIQTLIDSEVSKY
VSFRLLGSVSVYNSTQPLNSSGEKEETGMVKNSKEVKVRRVPGSKEDIFKDTSINLRDKR
KLMKFLLWASGSYEITTVFMENKHKRMGEFLKDVFGLDVKLADQICYAIAHCDDPEEKVE
RVLGRMNRYLKSIGRYGSGAFLVGQYGSAGEVAQGFCRACAVYGGTYVLGPSAKLESISA
SEDGVILRLPCHPRDIKASKVISTAEHLPENLRPAAAEVIITTAQCIAILPSFPELLRQS
RGSVHEKQDIQENENISDRQSEGTQTEEEGSEENEDTAVLLFPPEGEMGLVRALIMGEGT
GSCPPRQLSESTPPKCLEPYLSRLSSEPLFSAFYFSHRPKYDIPAEKLLPSDKNIVLLRP
CESLDMTEGMDWEAKQAEAAFWQVVGKDGQVGYFEKTEEGEESE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgtcggaattagaatcagatacatacgacgtagtggtcataggtaccaattta
tccggtagtattgtcgcagcatctctagccaaagcgggaaagtctatacttcatatcgat
ccgaacgaatactacggttcctcacactcttctttaacactagacgaacttattcaatgg
tcatcacttcattcctccccttctctcacttcacatcaatattctcaagcttccacttcc
actttaacaccttctcttcattccgatagacgacgttatgctctttcactctatcctgct
atacttccttcaagaggttcaatgatccaaactctcatagattcagaagttagcaaatac
gtttcttttcgtcttctcggttctgtctctgtatacaactccacccaaccattaaattca
tcaggagagaaagaagaaactgggatggtgaagaatagtaaagaagtgaaagtcagaaga
gtaccaggtagtaaagaagatatctttaaagatacttctataaatctaagagataagaga
aaactcatgaaattcttactttgggcttcgggatcatatgagatcacaacggtattcatg
gagaataaacataaaaggatgggagaatttttgaaggatgtttttggtttagatgtgaaa
ttggcggatcagatttgttacgctattgctcattgtgatgatccggaggaaaaagtggaa
agggtgttgggacgtatgaataggtatttgaaaagtattgggagatatggctcaggagct
ttcttggtgggacagtatggttctgctggagaggtagcacagggtttttgcagagcatgt
gcggtatacggaggaacatacgttcttgggccatccgccaaattagaatccatttcagct
tctgaagatggtgtgatactccgactaccttgtcacccgagagatataaaagcctcaaaa
gtgatttcaactgccgaacatttgcctgagaatttacgacccgccgcagccgaggtgata
atcaccaccgctcaatgtatcgccatcttaccatcttttcctgaacttctccgtcagtcg
cgtggctcagtccacgagaagcaagacattcaagagaacgaaaatatttcagacaggcag
tcagaaggtactcagacggaagaagagggatctgaggaaaatgaagatacagcggtattg
ctttttccgccggagggagaaatgggtttggttcgagctttgatcatgggagaaggtaca
ggttcatgtcctcctagacaattatcagagtcaacaccaccaaaatgtctcgaaccatat
ttatcacgattatcttccgaacccctcttctctgcattttacttctctcatagaccgaag
tatgatatacccgccgagaaacttctgccgtcggataaaaacatagtgttgttacgtccc
tgtgaaagtctagatatgacggaagggatggactgggaagcgaaacaggcagaagctgct
ttctggcaggttgtgggtaaagatgggcaagtgggatatttcgagaagacggaggaaggt
gaagagtctgagtag
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integrated database retrieval system
