Tremella mesenterica: TREMEDRAFT_70869
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Entry
TREMEDRAFT_70869 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
tms
Tremella mesenterica
Pathway
tms00250
Alanine, aspartate and glutamate metabolism
tms00410
beta-Alanine metabolism
tms00430
Taurine and hypotaurine metabolism
tms00650
Butanoate metabolism
tms01100
Metabolic pathways
tms01110
Biosynthesis of secondary metabolites
Module
tms_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
TREMEDRAFT_70869
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TREMEDRAFT_70869
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
TREMEDRAFT_70869
00430 Taurine and hypotaurine metabolism
TREMEDRAFT_70869
Enzymes [BR:
tms01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
TREMEDRAFT_70869
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
18498410
NCBI-ProteinID:
XP_007002058
JGI:
Treme1_70869
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MSLARHVDPDKLIARSLDHPIHKHVTRPDLQDIPYTSRYDIDIELPKYKMPSDGVSAKIA
YQLLHDELELDGNPNLNLASFVHTWVPDECQKLMQENLNKNLVDQDEYPAAQQIHERCVS
MISALWHAPPGASAMGTATTGSSEAIMLGGLALKRRWQDKMKAAGKDIHKPGPNIVMGAE
AQVALEKFARYFDVECRLVPISEESNYVMSPKEAMKYVDENTIGVFVILGSTYTGAYESV
EEMAAELDAYEAATGVHIPIHVDAASGGFVAPFATPKYVWDFRIPRVQSINASGHKYGMS
SVGVGWVVWRSPEFLPKDLIFELHYLGETDYSFNLNFSRPAHPILAQMFNFINLGFSGYK
RIIENDLSKARLICRALENSGYFTVLSNCHRPVDASGTLSAAAQVAGDMVKGQKPLDQED
AAFYHPSLPVVSFRLRDDVKAQYPGFKQEWIQLQLRSIGWIVPNYPLAPDCENLEILRAV
VRESLSGDLARKLIIDILQVTEELLKGAGPSFPMATISLNKSNEHKHDGIDKEHISNNTS
TYAKTC
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgcacgtcatgtcgaccccgacaagctcatcgcaagatctttggaccatcct
attcacaagcacgtaactcgtcccgacttacaggacattccttacaccagccgttatgac
atcgacatcgagctgcccaagtacaagatgccctctgatggtgtcagtgccaagattgcc
tatcagcttctgcacgacgaactagagcttgacggtaatcccaatctgaatttggcatca
ttcgttcatacatgggtaccggacgaatgtcagaaactcatgcaagaaaacctcaacaag
aatctcgtggaccaagatgaatatccggctgcgcaacagattcacgaacgttgtgtctct
atgatatccgcactctggcatgctcctcctggagcttctgccatgggtacagccaccacc
ggctcatccgaagcgatcatgctgggcggtctggctttgaaacgaaggtggcaggataag
atgaaggctgcgggaaaggacattcacaagccgggtcctaacattgtcatgggtgccgaa
gctcaagtggccttggagaaatttgctaggtactttgacgtcgaatgccgtttggttccg
atctccgaggagagtaactatgttatgtcccccaaagaagcaatgaaatatgtagatgaa
aataccatcggggttttcgtcatcctcggctcgacctacacaggcgcttacgagagcgtc
gaagagatggctgccgagctcgacgcctacgaggcggcaactggcgtccacataccaatt
catgtggacgctgcttctggagggtttgtggcaccttttgctacccctaagtatgtatgg
gacttccgtatccctagagtacagagcatcaacgcctcaggtcataagtatggaatgagc
tctgtcggtgtcggatgggtggtctggaggtcgcccgaattcctgcctaaagatctgatc
ttcgaacttcactacttgggcgagactgactattctttcaaccttaacttctccagaccc
gcccacccgattttggcgcaaatgttcaatttcatcaatcttggcttctccggctacaag
cgtatcatcgagaatgacctttccaaagcccgtttgatctgccgagcattggagaattct
ggctacttcaccgtcctgtccaactgtcaccgaccggtcgatgcttctggcaccctctct
gccgccgcgcaggtcgcgggggacatggtcaagggtcagaaacctctcgatcaggaagat
gctgccttttaccacccttccttgcccgtggtcagcttcaggctccgagacgacgtaaag
gcgcagtatcctggtttcaaacaggaatggatccagctgcaactccgtagtatcggttgg
atcgtgcccaactacccactcgcgcccgactgtgagaacttagaaatactcagggcagtg
gttagggagtccctctctggcgacctggcccgaaagttgattattgatattttgcaagtg
accgaagagctgctcaaaggtgccgggccttcgttccccatggcgactatcagtctcaac
aagagcaatgagcacaaacatgatggaattgacaaggagcatatctctaacaacacatcg
acctatgccaagacatgttga
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integrated database retrieval system