Tremella mesenterica: TREMEDRAFT_71204
Help
Entry
TREMEDRAFT_71204 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K17301
coatomer subunit beta
Organism
tms
Tremella mesenterica
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tms04131
]
TREMEDRAFT_71204
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tms04147
]
TREMEDRAFT_71204
Membrane trafficking [BR:
tms04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
TREMEDRAFT_71204
Exosome [BR:
tms04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
TREMEDRAFT_71204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT
HEAT_2
Coatomer_g_Cpla
DUF3730
Motif
Other DBs
NCBI-GeneID:
18498483
NCBI-ProteinID:
XP_007003094
JGI:
Treme1_71204
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MNPSATCYTIVHDDLLDTPSSNDLRNALQKGSDEVKLETVKRIIIGTLNGHSYPQLLMPI
IQYVMPSRNKQIKKMLHFYWEICPKLDDNGKLKQEMILVCNAIRNDLQHPNEYIRGATLR
FLQKIRESELLEPLVPTVRSCLEHRHSFVRKNAVFAVWTIYQDHEQLILMHGTSGHFLAA
ESDSTCKRNAFVALCNISQSTAVRYVLTNFDQISGMDELMQMAVIELVRKEAKIEGGHRA
KWIRCIFELLNSPSHAVKYEAAVSLTTLTQNPAAVKAAAGAFAELIVKEADNNVKIIVLD
RFNVLRSKHEHVLDGMVMDILKVLSSPDMEVKRKALAVALELVTSRNVEDVVLFLKKQLQ
STMEQEYDKNIEYRQLLIQSIHSCAIKFSEVAANVVYVLMDFLGDSSNPSAVDVIAFVRE
VVEKFPDLRPAITDKLISTFSEIKSGKVFRGAMWIVGEYCTGVAEIKHAVHELRKVIGEI
PILASEQRLLDEAEAADESSTEKPAEQPKAITTTRVLPDGTYATETVYTSNVAAARLEQV
RAASKPPLRALILGGDFFTGSVLAATLTKLVMRFSESGPPAEDINTLRAEAILMMTSVIR
VGQSKFSAVPIDEDSQERIMNCIETLAQLQNMGVMTQVFLEDTKAAYAKMVKNEEKKAKA
KREKESKTTIVQVDDLISFAQLSKKTAGGDADDLDYDLVRATGTEIQEDFVSKLSRIVQL
TGFSDPVYAEAVVTIQAFDVLLDVLIVNQTTETLQNLTVEFATLGDLKLVERPAPHTLAP
HGFHHIAATIKVSSTETGVVFGNIVYDKQGAADASVNIVMNDIHCDILSFVQPNYVPESQ
FRSLWTEFEWENKVAVNSTMTDLRAFLDHLVKSTNMLCLTPDAALEGDCQYLSANLAAKS
LFGEDALANCSIELAEDGQGLTGHVRLRAKSQGIALSLGDKVTVSQKAIKA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaacccttcagccacttgttacactatagtccatgatgatctcctcgacaccccatcg
tctaatgaccttcgtaacgcccttcaaaaaggttcggacgaggtcaagttagagaccgtc
aagaggatcattatagggactttgaacggacattcatatcctcaactactcatgccaatc
attcaatatgtcatgccatctcgaaataagcaaatcaagaaaatgttacatttctactgg
gagatatgtcccaaacttgatgataacggaaagctcaaacaggagatgattctggtatgc
aatgccattcgtaatgacctgcaacatcccaatgagtatatacgtggtgctactttacgt
ttcttgcaaaaaatcagagaatcagaattactcgaacctctagtacctaccgttagatca
tgtcttgaacatcgacattctttcgtccgtaagaatgcagtctttgctgtatggaccata
tatcaagatcacgaacaattaatcctgatgcacggaacttctggacacttcctagctgct
gaatccgattctacttgtaaacgcaatgcttttgtagcactctgcaatatctctcaatcc
actgctgtcagatatgtcctgaccaactttgaccagattagtgggatggacgaacttatg
caaatggccgtgattgagcttgtcaggaaagaagctaaaatcgaaggaggacatcgagcc
aaatggataagatgtatcttcgagctactcaactctccatcacacgccgtcaagtatgaa
gctgcagtcagccttacgactctcacgcagaatcccgccgctgtcaaagctgcggccggg
gcattcgcagaattaatagtcaaggaggcggataacaacgtcaaaatcatcgtgttggac
aggttcaacgttctgagatctaaacatgagcatgtgcttgatggaatggtgatggacatc
ctcaaagttctctcgagtcctgacatggaagtgaaacgtaaagctcttgcagttgcccta
gaattggtgaccagtcgaaatgtagaggatgtggttttgttcctcaagaagcaattacaa
agtaccatggaacaggaatacgacaaaaatatcgaatatcggcaactcctcattcaatcc
atccactcatgtgccatcaaattctcagaggtcgccgccaatgtggtatatgtactcatg
gactttttgggcgactcaagcaacccttccgccgtcgatgttatcgctttcgttcgtgag
gtggtcgaaaaattccccgacctccgaccagccatcaccgataagcttatatccactttc
agcgagatcaaatccggtaaagtcttccgtggggccatgtggattgttggcgagtattgc
acaggtgttgcggagatcaagcacgcagtccacgagttacgaaaagtcatcggagaaata
cccatcctggcttcggaacaacgattgctggacgaagcagaggctgcagacgagtcttcg
accgagaaaccagcagaacaacccaaagccatcaccaccacccgtgtcctccccgatggc
acttacgccactgaaaccgtttacacgtccaatgttgccgcggccagattggaacaggtc
cgtgcagcttcgaaaccaccacttcgagctctcatactgggaggagactttttcaccggc
tctgtcctggctgcgactctcaccaaactcgtcatgcgattctctgagagtggaccaccg
gcagaggacatcaacactctgagagcggaagcgatcctcatgatgacatctgtcatccgt
gtgggccaatccaaattctctgccgtaccgatcgacgaagattcgcaagagaggataatg
aactgcatcgagactcttgcgcagttgcaaaatatgggcgtgatgactcaagtcttccta
gaggacaccaaagcggcgtatgccaagatggtgaagaatgaggaaaagaaagcaaaggcg
aagagagaaaaagaatcgaagactacaatagttcaagtggacgatttgatctcttttgct
cagttatcgaagaagacagccggaggggatgcggatgatcttgattatgatttagtacgt
gctaccggtacggaaatacaagaagactttgtttccaaattatctcgtatagtccaactc
actggcttctctgatcctgtctatgccgaggctgtcgttactatacaagcgtttgatgtg
cttttagacgttttgattgttaatcaaacgacggagactctgcagaacctgacggtcgaa
tttgctactttgggagacctcaagttggtagagagaccagcacctcatacattggcgcct
cacggcttccaccatatcgccgccactatcaaagtgtcatcgactgagacaggggtcgta
ttcggtaacattgtttatgacaaacaaggagcagccgatgccagtgtcaacattgtcatg
aatgatattcattgtgatatcctcagttttgtacaaccgaactatgttccagaatcccag
ttccgaagcctgtggacagagtttgaatgggagaacaaagtagccgtcaattccaccatg
acggatctccgagcgttcttggatcatttggtcaaatctaccaatatgttgtgtttgaca
ccggacgcggcgttggaaggggattgtcaatatctctctgcgaatttagctgcgaagagt
ttgtttggcgaggacgctttagccaattgctcgatagaactagcggaagatggacaggga
ttgacgggtcatgtgagattacgagcaaagtctcaaggtatagcattgtcattaggggat
aaagtgacagtttctcaaaaagcgataaaggcttga
DBGET
integrated database retrieval system
