Tremella mesenterica: TREMEDRAFT_71970
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Entry
TREMEDRAFT_71970 CDS
T03139
Name
(RefSeq) hypothetical protein
Organism
tms
Tremella mesenterica
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ApoO
Minor_capsid_3
Motif
Other DBs
NCBI-GeneID:
18498656
NCBI-ProteinID:
XP_007005914
JGI:
Treme1_71970
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MLLLRVVQLPRSNQARKAISTARRHPWSIISIISTLPFLLLLSLTSTIICPPPKQHSPIS
KFVLSSLGLHSKSAYGPLREKFCYPANVYHDSVLVPYVYPQIENVQHTIVTHPIYTHHVL
PTYTSANQVTRKIWNGPVKPVVNRVRRGAKRFYLTFVQPHLPWARQKVYLAFSPLTSRIE
AAHKSYVSPHLSTAQRYANDASGRSYQLYQSVAGHPLTKQSAGYAATARDMAYKNYMVVR
PHLIRAAKETRRVVLQVVLPRILKGLEITSGQIYRQSTIIRIKSGKFYAAYLEPHVGPYV
DKVSLASKPYTDAFYVKIYKPFVKPILVAILPEVVMAPEPKKSFWAMIADILPEVGSSSV
GEGKAAMKETYDRAEKVEAPKKVKESASSVKSKEKASASSIQQKAKESEKGKLSKTEIQK
SAEVIKKRVDQAGQEGYDKLSSQLLDSHTKIVAEKMPLHAQNARQELDRFIDRVITGFNK
FWTDPKKFTPELVDKMSRDAESRVAGEVRRVKAGLGDRRKFIEKEDQKLIDSASKGVDEA
MGKEFEALLVQMSSVEGATTKDWSKLNAVKSAAETWKDKYHALATAKSPLKALNHQSASV
DQGFALIHTELDDMFEGYKARTGILRRSALDQYEAAQELASASSSSSGSKPSSTGNGRYS
ILPVAEAVGIAAAGEAVIGKGKEQIMDAFNQASAALAGQESSTGIVDQAKSLGEQVISSA
SASVHSATRSAMSAVGVTPSPESPREHLESVVEAASNSVYSVYSAVEDQASSLSSAASDA
IHQGTRSVISAVGGTPTPEGAAEHLASIGNVVAQGAAQVYGVVEENVHHATRSAMSAVGA
TPSPETPQEHFESIVDGASSLAGNAAASASSVIHDASSAVHDATRAGMRAIGVTPSPDSP
KEHLESIANDASSLLHDATRSLVKAVGATPSPESPGEHLESVLDAAGSVYSNVDSKASSL
YTEVSSTASSAVSEMTNQAALLASQIQSLVGLAPTPTPLASSASAYVGSLYLAGSTAGAE
LLAEGSSLLVSLQSEASKSIHSATRAASRAVGATPSPEGVKEHLESVSSKVESVARSVIG
HEEL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgttgctactcagggtggtgcagttgccaaggtcaaaccaagctcgaaaagcaatatca
actgctcgtcgacatccatggtcaattatatctataatttccactctcccattcctcctc
cttctatctctcacctctacaatcatctgtcctccacctaaacaacactccccaatctcg
aaattcgtattatcttcacttggtcttcattctaaatcagcttatggtcccttacgcgag
aaattttgttaccccgcaaacgtatatcacgattccgttcttgttccctatgtataccct
caaatcgaaaatgtccaacacaccatcgtcactcatcctatttatacccatcatgttctt
cctacttacacgtctgccaatcaggtgacgagaaagatatggaatggacctgttaaaccc
gtggtgaacagagtgagaagaggggcaaaaaggttttatctaacttttgttcaaccccat
ttaccatgggcgagacaaaaggtatacctcgctttctctcctttgacatctcgaatcgaa
gctgctcacaagtcatacgtctctccacatttgagtacggcgcagagatacgcaaacgac
gcttctgggagatcatatcaattgtaccaatcggtggcgggtcatccattgaccaaacaa
tccgccgggtatgccgctacagctagggatatggcatacaaaaattacatggtcgttcgt
ccacatctcatccgcgccgctaaagaaactagacgggtcgttcttcaggtcgttctccct
aggatattgaaaggtttggaaattacctctggtcaaatatacagacaaagtactatcatt
cgcataaaatcaggcaaattctacgctgcgtatcttgaaccgcacgttggtccttatgta
gacaaggtatctctcgccagtaaaccatataccgacgccttttatgtcaaaatttataaa
ccttttgtaaaacccattttggtggccatactacccgaagtcgtgatggctccggaaccc
aagaaaagtttctgggcgatgattgcggacatattgccggaagtcggatcttcatctgtt
ggcgagggaaaggcagcgatgaaggaaacttacgatcgagcggaaaaggttgaggcgccg
aagaaagtcaaagagagtgcgagcagcgtcaagagtaaagagaaggcgagtgccagtagc
attcagcagaaggcgaaggagtctgagaaagggaagctgagcaagacggagatacaaaaa
tcggcggaagtgatcaaaaaacgagtggaccaagcgggacaggaggggtacgacaagttg
tcatcccagttactcgacagtcacaccaaaatcgtcgcggagaaaatgcccttacatgct
caaaatgcccgacaggagctggatagattcatcgaccgcgtcatcactggtttcaacaaa
ttctggacggacccaaagaaattcacgcccgagttggtagacaaaatgtccagggatgca
gagagccgggtggcgggggaagtacgaagggtcaaagctggtttaggagataggcggaag
ttcattgaaaaggaggatcagaagttgattgattcggcttccaaaggtgttgatgaggct
atggggaaggaatttgaggctttgttggttcagatgagctctgtcgaaggtgccactaca
aaggattggtcgaagctcaatgcagtcaagagcgcggccgagacatggaaagacaaatat
cacgctctggctactgctaaatcacccctgaaagctttaaatcaccaatctgccagcgtc
gatcaaggtttcgcgctcattcacaccgagcttgatgacatgtttgaaggctacaaagct
cgtaccggaatcctcagacgctccgctttagaccagtacgaggcggcacaagaattggcg
tcggcttcgtcttcatcgtcgggcagtaaaccttcgtctaccggtaatggacgctactct
attcttcccgtggcggaagctgtgggaattgcagctgccggtgaggctgtgatcggaaag
ggcaaagagcaaatcatggatgcttttaatcaagccagtgctgctttagccggccaagag
tcttcgaccgggattgtcgaccaagcgaaatccctcggcgaacaagtcatctcttctgca
tcggccagtgtgcactctgccactcgatcggcaatgtcagcagtcggcgtcacaccttct
ccagagtcccctcgtgaacacctagaatcggtagttgaagccgctagcaattcggtctac
tctgtttactcggctgtagaagatcaagcttcctctctctcttccgccgcgtcagatgcc
attcatcaaggaacacgatctgttatctctgcggttggaggcactccgacccctgaaggc
gccgctgaacatcttgcttctatcggaaatgtggtcgcccaaggtgctgctcaggtgtat
ggagtggttgaagagaatgtccatcatgccactcgttcagcgatgtctgccgttggtgcc
actcccagccccgagacccctcaagaacatttcgaatccatcgtcgatggcgcgtcttca
cttgctggtaacgccgccgcgtctgcatcttccgtcattcacgatgccagttcagcggtt
cacgacgccactcgagccggtatgcgagctatcggtgtaactccctctcctgattcccca
aaagaacacctcgaatcgattgccaacgacgcgtcgtccttactacatgatgctacccgt
tccctcgtcaaagcagtgggagctaccccttcacccgaatcgccaggggagcacctcgaa
tccgttcttgatgctgcaggatctgtctactcaaacgttgattccaaagcatcttctctc
tacaccgaagtctcttccaccgcttcatctgcagtttcagaaatgacaaatcaagcagct
ctcctagcctctcagatccaatcacttgtgggattagcacctaccccaacacctctcgct
tcatccgcttcggcatatgtaggttctctctatttggcgggatcgacagctggagccgag
ttgttggcagaaggaagtagtcttctggtcagtttacaatcagaagcgagtaaatcgata
cattcagccactcgagcggctagtagagcggtaggagcaacacccagtcctgaaggagtc
aaggagcatttagaaagtgtaagttctaaagtggaaagtgtagcgagaagtgttatagga
cacgaagagttataa
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