Trichechus manatus latirostris (Florida manatee): 101340355
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Entry
101340355 CDS
T05135
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04064
NF-kappa B signaling pathway
tmu04217
Necroptosis
tmu04380
Osteoclast differentiation
tmu04622
RIG-I-like receptor signaling pathway
tmu04625
C-type lectin receptor signaling pathway
tmu04668
TNF signaling pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101340355
04668 TNF signaling pathway
101340355
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
101340355
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101340355
04625 C-type lectin receptor signaling pathway
101340355
09158 Development and regeneration
04380 Osteoclast differentiation
101340355
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tmu01002
]
101340355
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101340355
Enzymes [BR:
tmu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101340355
Peptidases and inhibitors [BR:
tmu01002
]
Cysteine peptidases
Family C67
101340355
Ubiquitin system [BR:
tmu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101340355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
101340355
NCBI-ProteinID:
XP_023582685
UniProt:
A0A2Y9QLA4
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MSSSLWSQEKVTSPYWEERIFYLLLQECSVTDKQTQKLLKVPKGSIGQYIQDRSLGHSRI
PSAKGKKNQIGLKILEQPHAVLFVDEKDVVEINEKFTELLLAITNCEERFSLFKNRNRLS
KGLQIDVGCPVKVQLRSGEEKFPGVVRFRGPLLAERTVSGIFFGVELLEEGRGQGFTDGI
YQGKQLFQCEEDCGVFVALDKLEIIEVDDTGLESDYAGPVDTMQVELPPLEINSRVSLKV
GETLESGTVIFCDVLPGKESLGYFVGVDMDNPIGNWDGKFNGIQLCSFASVESTLLLHIN
DIIPDSVTQERRPPKLAFMSRGVGDKGSSSHNKPKPTGSTSDPGNRNRSELFYTLNGSSV
DSQPQSKSKNTWYIDEVAEDPAKSLTELSPEFGHSSPPLQPPPMNSLSNENRFHSLPFSL
TKMPNTNGSMGHSPLSLSVQSVMGELNNTPVQESPPVATSSGNSHGLEVGSLAEVKENPP
FYGVIRWIGQPPGLNEVLAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPDS
RFASLQPVSNQIERCNSLAFGGYLSEVVEENTPPKMEKEGLEIMIGKKKGIQGHYNSCYL
DSTLFCLFAFSSVLDTVLLRPKEKNDVEYYSETQGLLRTEIVNPLRIYGYVCATKIMKLR
KILEKVEAASGFTSEEKDPEEFLNILFHHILRVEPLLKIRSAGQKVQDCYFYQIFMEKNE
KVGVPTIQQLLEWSFINSNLKFAEAPSCLIIQMPRFGKDFKLFKKIFPSLELNITDLLED
TPRQCRICGGLAMYECRECYDDPDISAGKIKQFCKTCNTQIHLHPKRLNHKYNPVSLPKD
LPDWDWRHGCIPCQKMELFAVLCIETSHYVAFVKYGKDDSAWLFFDSMADRDGGQNGFNI
PQVTPCPEVGEYLKMSLEELHSLDSRRIQGCARRLLCDAYMCMYQSPTMSLYK
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaagcttatggagccaagaaaaagttacttcaccctactgggaagagaggatt
ttttatttgcttcttcaagaatgcagtgttacagacaaacaaacgcaaaagctccttaaa
gtcccaaaggggagtataggacagtatatccaagatcgttctttggggcattcaaggatt
ccttctgcaaaaggcaagaaaaatcagattggattaaaaattttagagcaacctcatgca
gttctttttgtggatgaaaaggatgttgtagaaataaatgaaaaattcacggagttactt
ttggcaattaccaactgtgaggagagattcagcctgtttaaaaacagaaacagactaagt
aaaggcctccaaatagacgtgggctgccctgtgaaagtacagctgagatctggggaagaa
aaatttcccggagttgtgcgcttcaggggacccttgttagcagagaggaccgtgtcggga
atattctttggagtagaattgctggaagaaggtcgtggccaagggttcactgatggaatc
taccaagggaagcagctttttcagtgtgaggaagattgtggagtgtttgttgccttggac
aagctagaaatcatagaagttgatgacactggtttggaaagtgattatgcagggccagtg
gacacaatgcaagttgaactcccccctttggaaataaactccagagtttctttgaaggtt
ggagaaactttagaatctggaacagttatattctgtgatgttttgccaggaaaagaaagc
ttaggatattttgttggtgtggacatggataatcctattggcaactgggatggaaaattt
aatggaatacagctttgtagttttgcaagtgttgaaagtacactccttttgcatatcaac
gatatcatcccagatagcgtgacacaggaaaggaggccccccaaacttgcctttatgtca
agaggtgttggggacaaaggttcatccagtcataataaaccaaagcctacaggctctacc
tcagaccctggaaatagaaacagatctgaattattttataccttaaatggatcttctgtt
gattcacagccacaatccaaatcaaaaaatacatggtacattgatgaagttgctgaagac
cctgcaaaatcacttacagagctatctccagagtttggacattcttcaccaccactgcag
cctcctcccatgaactcgttatctaatgagaacagatttcactctttaccgtttagtctg
acaaagatgcccaataccaatggaagtatgggccatagtcctctttctctgtcagttcag
tctgtgatgggagagctaaacaatacgcctgtccaggaaagcccacccgtggccacatcc
tctggtaactctcatggtctggaagtaggctccctggctgaagttaaagagaaccctcct
ttctatggggtaatccgctggatcggtcaaccaccaggactcaatgaagtactagctgga
ttagaactggaagatgaatgcgccggctgcacagacggaacctttcggggcactcggtat
ttcacctgtgccctgaagaaggcactgtttgtgaaactcaagagctgcaggcctgattcg
agatttgcatctctacagccagtctccaatcagatcgaacgctgtaactctttagccttt
ggaggctacttaagtgaagtagtagaagaaaatactccaccaaaaatggaaaaagaaggt
ttagagataatgattggaaagaagaaagggatccagggtcattacaattcttgttactta
gattcaaccttgttctgcttatttgcttttagttctgttctggacactgtgttacttaga
cccaaagaaaagaatgacgtagaatattacagtgaaactcaaggactactgaggacagaa
attgttaatcctttgagaatatatggatatgtgtgtgccacaaaaattatgaaactgagg
aaaatacttgaaaaagttgaggctgcatcaggatttacctctgaagaaaaagatcctgaa
gaattcttgaatatcctgtttcatcatattttaagggtggagccattgttaaaaataaga
tcggcaggtcaaaaagtacaagattgttacttctatcaaatttttatggaaaaaaatgag
aaagttggagttcctacaattcagcagttgctagaatggtcttttatcaatagtaacctg
aaatttgcagaggcaccatcatgtctgattattcagatgcctcgatttggaaaagacttt
aaactatttaaaaaaatttttccttctctggaattaaatataacagatttacttgaggac
acccccaggcagtgccggatatgtggcggacttgcaatgtacgaatgcagagagtgttat
gacgatcctgacatctcagccggaaagatcaagcagttctgtaagacctgcaacacccag
atccaccttcatcccaagaggttgaatcataagtacaaccccgtgtcacttcccaaggat
ttgcctgactgggactggagacacggctgcataccctgccagaagatggagttattcgct
gtgctctgcatagagaccagccactacgttgcttttgtgaagtatgggaaggacgactcg
gcctggctcttctttgacagcatggctgatcgggatggtggtcagaatggcttcaacatt
ccgcaggtcaccccatgccctgaagtaggcgagtacttgaaaatgtctctggaagagctg
cattccttagattccagaaggatccaaggatgcgcgcgaagacttctctgcgatgcgtac
atgtgcatgtaccagagtccaaccatgagtttgtacaagtaa
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