Trichechus manatus latirostris (Florida manatee): 101352190
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Entry
101352190 CDS
T05135
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101352190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101352190
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
101352190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_8
TPR_14
TPR_17
TPR_12
TPR_11
ANAPC3
TPR_9
Sel1
Fis1_TPR_C
TPR_15
TPR_5
TPR_20
Sey1_3HB
BTAD
PknG_TPR
Retrotran_gag_2
TPR_6
Motif
Other DBs
NCBI-GeneID:
101352190
NCBI-ProteinID:
XP_023585890
UniProt:
A0A2Y9QR09
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHVEVARTWHKLIKTRQEEGADNQELHQLWRKLTQLLAESTEDQNNETQQ
LLLTAFENALGLSDKIPSEDHQVLYRQFIQCLFKFPHETARLKKACEGMINIYPSVQYPL
EVLCLHLIESGSFTDEAQQYCCRLVEMDSRSGPGLIGLGIKALQDKNYEDALKNLTEGLK
ESPLCTTGWYHLAEAQLKMHRPKEAILSCSQALKNIDNLGVSGGSLHQKNLCLHLKAEAL
IKLSDYESSEEAIHTLDQVSDANNIPGLLVLRSLACLNKGLLDEATKIMEDLLSSYPDLA
EAHALEALIHFTKKDYLQAEKCFQKALEKDNEVAEYHYQLGLTYWSMGEETRKDKTKAFT
HFLKAARLDTYMGKVFCHLGHYYRDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMDTALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFIKATELNPESTHSVFKVAAIQQILGKYKEAVAQYQLIIK
KNEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYVEKALEYFTWALQHRADVSCLWKLV
GDACTSLYAVSPSKVNVHVVGVLPGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAETGSNMNDLKELLEKSLHCLKKAVRLDSNNHLYWNALGVVACYSGV
GNYALAQHCFIKSIQSEQINAVAWTNLGVLYLTNENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYRYNILQMN
AIPAAQVVLSKYVERIQDYAPAFTMLGYLNEHLLLKKEAADAYRRAILLLQTSEDQDTYN
VTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGLALALFLKGLYKESSKTYERALSI
VESEQDKAHILTALAITEYKQGKMDTAKTLLFKCSILKEPTAESLQALCALGLAMQDVTL
SKAALNELLKHIKQKDNGYQRYLLTAAIYALQGHSVAVQRQASKAVHSNPADPALWSLLS
RVVAQYTQRNAKGGAVAGNVAHILDSNHGKKALLYTAVNQVAMGSSSAEDEKNIAVKTIQ
KAALLSPGDPAVWAVLMAACYADDKLALVNNTQPKKMDIYLALLSAISASIKDKEFPENY
NQSLEKWSLSQTVTGLIETGRISEAEALCTKNLKNHPDQPAVILLLRQVQCKPLLESQKS
LPDAVLEELQKTVMSNSTSVPAWQWLAHVYQSQGMMGAAEMCYRKSLQVASQQGSWSGKL
SSLLRLALLALEIFMANISNDHWQSLVQEATTEALKLCFCPLAILVQALLQFNRKMGARE
TRRLLERVVYQPGYPKSVVSTARWYLLRHLYAKDDYELIDVLVNNAKTHGDTRALELNEK
LSSQ
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaaagaggtgaagacggctctgaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaagcattgtaaggcagttttaaaacaagagaaaaataactac
aacgcctgggtttttattggtgttgctgcagccgagctagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgaactagagccagaccaattactagcatggcaggggtta
gcaagcttatatgagaaatgtaatcacataaatgctaaggatgacttacctggtgtctac
caaaagctcctggatctctatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaactcgtggatctgtattaccaagaaaagaaacatgtagaggtggcccgaacatggcac
aagttgataaagacacggcaggaagagggtgcagacaaccaagagcttcatcagctatgg
aggaaattgactcagttgctggccgagagtactgaggaccagaataatgaaacccagcaa
ctgcttttaacagcttttgagaatgcattgggcttatcagataagattcctagcgaagat
caccaagtactttatagacagttcattcagtgtttattcaagtttcctcacgagactgct
aggttgaagaaggcctgtgaaggaatgattaacatctatcccagtgtacaatatccatta
gaagtgctttgtttgcatttaattgaatcaggaagttttactgatgaagcacaacagtat
tgttgcagattagtggaaatggattcaagaagtggtccaggcctcattggcttaggcatt
aaagcattacaagacaaaaactatgaagatgctcttaagaacctaacagaagggttaaag
gaaagccctctctgtacaactggatggtatcatctggcagaagcccaactcaaaatgcat
agacctaaggaagctattctttcatgcagtcaagctctgaagaacatagataatcttggt
gtatctggtggcagtcttcatcagaagaatctttgtcttcatttgaaagcagaggctttg
attaaactctcagattatgaatcttcagaggaagcgattcatactcttgatcaggtttct
gatgcaaataatatcccaggacttttggttctcagaagcttggcctgtctgaacaaaggc
ttgttagatgaagctacaaagattatggaagaccttctctcttcttaccctgacctagct
gaagctcatgccctggaggctttgattcattttaccaaaaaggactatctacaagcagaa
aaatgttttcagaaggctcttgagaaagacaatgaagttgctgaatatcattaccaactt
gggttaacatattggtccatgggtgaagaaacaagaaaagataaaacaaaggcttttacc
cactttctgaaggctgcaagactggatacatacatgggcaaagttttctgccatttaggc
cattattacagagatgtagtgggagataaaaacagagcccgtgggtgttacaggaaagct
tttgaattagatgacactgatgctgaatccggagctgcggcagttgacctaagtgtggaa
cttgaagagatggacactgccttagctatcctaaccacagtaactcaaaaggcaagtgct
ggaactgcaaaatgggcctggcttaggcgaggactatactatttgaaagcaggtcaacat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggagtcattaggagaggcatacttaagcagaggtggctatacaacagctttgaaatcc
ttcatcaaagccaccgagttgaacccagaatccacacacagtgtgtttaaggttgcagcg
atacagcaaatcctaggcaaatacaaggaggctgtagctcaataccagctgatcattaaa
aagaatgaagattatgtgcctgctttgaaaggtctgggtgaatgccatcttatgatggca
aaagcagctctagttgattatcttgatgggaaagctgtagactacgtagaaaaagcactg
gaatattttacttgggctctgcagcatcgagctgatgtgtcttgcctttggaagctagtt
ggggatgcttgcaccagtttatatgctgtctcaccatctaaagtgaatgttcatgttgta
ggagtccttccgggtcagaaagaaggaaaacaagtattgaagaaaaatgagctcctccat
cttggaggaaggtgttacggtcgtgcattaaaactgatgtctacatctaatacatggtgt
gaccttggaattaattattatcgccaagcacaacatttagctgaaacaggcagcaatatg
aatgatcttaaagagttgctggagaaatctttacattgtctgaaaaaggcagtgagactg
gacagtaataaccacttatactggaatgcacttggtgtggtagcttgttacagtggtgtt
ggaaattatgcccttgctcagcactgtttcatcaagtcaattcaatcggaacagattaat
gctgttgcatggaccaacttgggagtgttatacctcacaaatgaaaacattgagcaagct
catgaagctttcaaaatggctcagtctcttgatccatcttatttgatgtgctggattgga
caagctctgattgcagagacagttggaagttatgacacaatggacctctttaggcacact
acggaactcagtatgcacaccgaaggtgcaattggttatgcgtattgggtctgtacaaca
ttgcaagacaaaagcaacagagaaacagaactgtaccgctacaacattctccagatgaat
gctattccagcagcacaagttgttttgagtaaatacgtagaaagaattcaggattatgct
ccagctttcacaatgttgggttacttaaatgaacatctactactgaaaaaggaagcggca
gatgcataccgaagggcaattttgttgttacagacttcggaagaccaggatacttataat
gttacagtaagaaattatggcagattgttatgttccattggcgaatatgataaagctatc
caggcttttaagtcaacacccctggaagagttggaggacatcataggtctcgcattagct
ttatttttgaagggtctatataaagagagcagcaaaacctatgagagagccttgtctatt
gttgaatcagagcaagacaaagcacatatcttgacagcgctggcaataacagagtataaa
caaggaaaaatggacacagccaagacattgctctttaaatgttctatcttaaaggaacca
accgcagaaagccttcaagccctgtgtgctctaggattggcaatgcaggatgttacacta
tccaaagcagcacttaatgaattactgaagcacatcaaacagaaagacaatggttatcag
aggtaccttcttactgcagctatttatgcactccagggccacagtgtggcagtacagaga
caagcatccaaagctgttcacagtaacccagctgaccctgctctttggtctctgttgtcc
cgagtggttgctcagtatactcagcgaaatgcaaagggaggtgctgtagcaggaaatgtg
gctcatatactggactccaatcatggaaagaaggcattactgtacactgcagtaaatcag
gtggccatgggaagcagttcagctgaagatgaaaaaaatattgctgtaaagaccattcag
aaggcagctctcctttctccaggggaccctgctgtctgggccgtgctaatggcagcctgt
tatgctgatgataaactggccctagtgaacaacactcagccaaagaagatggatatatac
ttggctctgttatctgctatttctgcttcaattaaagacaaagaattccctgaaaattac
aaccaatctcttgaaaagtggtctctctcacaaactgtcactggtctaatagaaactgga
agaatatctgaagctgaagccctctgcacaaagaatttaaaaaatcaccctgatcagcca
gctgttatcttacttttgagacaagttcagtgtaaaccactcctggagtcacaaaaatct
ctcccagatgctgttcttgaagagctgcaaaaaacagtcatgtccaactctacctctgtt
cctgcttggcagtggctggcacacgtgtatcagtctcaaggaatgatgggtgctgcagag
atgtgttacagaaagagcctacaagtggcttcccagcagggcagttggagtgggaagctc
tcaagtctattgagactagcactgcttgcattagaaatcttcatggctaatatttccaat
gatcactggcaatccttggttcaagaagctacaactgaggccttgaagctttgcttttgt
ccactggctattctcgtacaagctttgttacaattcaaccgcaaaatgggggcaagggag
acacggcgacttttggagagagtagtatatcaacccgggtatcccaaatctgttgtgtca
actgctcgttggtacctattgagacacttatatgccaaagatgactatgagctaattgat
gtgctagtaaacaatgccaaaactcatggagatacaagagcactggaactgaatgagaaa
ctgtcctcacagtaa
DBGET
integrated database retrieval system
