Trichechus manatus latirostris (Florida manatee): 101358547
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Entry
101358547 CDS
T05135
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmu03036
]
101358547
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101358547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
101358547
NCBI-ProteinID:
XP_004370396
UniProt:
A0A2Y9QFU8
LinkDB
All DBs
Position
Unknown
AA seq
2717 aa
AA seq
DB search
MIMKIQKKEKQLSNFKVLNHSPMSDASVNFDYKSPSPFDCSTDQEEKIEDISSQCLPQKD
LYATEEEADTLFPRKMTSHNGMEDSGGGGTGVKKKRKKKNPGEQEGAAKGSKDREPKPKR
KREPKEPKEPRKAKEPKKAKEPKEPKQKDGAKKARKPREASGTKEAKEKKSGADSAARTK
SRKASKEQGPTPVEKKKKGKRKSETTVESLELDQGLPNSSLRSPEESTESADSQKRRSGR
QVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQVEEPPEDDANIIEKILAS
KTVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKH
IFTEPDEDLFNPDYVEVDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDP
AKVKEFESLQVLPEIKHAERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRK
NCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYH
GSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEA
HRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFG
DLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFS
FLAKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDASDFQLQAMIQ
AAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQA
AIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSK
AVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTNGVQQLSKMEVEDLLRKGA
YGALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDP
NFWQKWAKIAELDTEAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPT
RSRRLNDKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVY
CVKHYKGDEKIKSFIWELITPTKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKN
ADWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGAPAREL
EVSLPDIDYVEIPADWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSL
SAEQGVTDGTSDIPERGNMDKEDNAGDKLDGLQKQMESSSDGGDGIFGEKKDDSQAAQDG
SEPDRSPWPVSSALTARLRRLVTVYQRCNRKEPCRPEILGPGNQAYWVQEEMFRRTSEMD
LINKEAQKRWTRREQADFYRTVSSFGVVYDQEKKTFDWTQFRSISRLDKKSDESLEHYFH
SFVAMCRNVCRLPAWKDGGPPDPTIYVEPITEERAARALYHIELLRKVREQVLRCPQLHE
RLQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKR
TDTQAPESLCCLYQTNSKLYESLTYTQMSRTSESFDNEPENLVKIESREDHLGQPGGSLP
DITCENFISKVQDVISINHDESLLPESLESVIYGKTVFSQEPSSFQESLSSSNADSRRDA
VAVSASKDGDCQPGGHEAEIASGPSFMSILEAGVAQINNKNGKHLLMSISKEREFCCSEA
GQRPGSIRHLETKCMASPSLDQGNESGFVDMCNLSVCDSKTSLSANQQLIDLLENKSLES
KLILNHSDEEEEEEGNEEENLDIPADIKKPEVLHLTESTTTIPREKNRGFHVDEAKKGSL
EAVSLSTGPQRAFPPAACQCHCRHMERWKASIENDDFEVEKPKGYNPDLYTSRANNITVE
SEPAAIPSEPFKVKHELLKEPWKESAEGKRGFPIYPLERSELKSEDMNFENKDDYDRNGH
CHSQDYPGRYSEEESKSSTSGIAGDVTDDLQEVRAPTIAQLLQEKTLYSFSEWPKDRVII
NRLDNICHVVLKGKWPSSQQYEPSGTLPTPVLASSAGSRNSLSEPEASEHGFSNGAALVA
QIQKESFLAPVFTKDEQHHRHPYEFEVERDAKARSLEQFSATHGHPPIVLNGWHGESAID
LSCTSEGSPGATSPFPVSASTPKIGTISSLQGALGMDLSGILQAGLIHPVTGQIVNGSLR
RDDAATRRRRGRRKHVEGGMDLIFLKEQTLQAGILEVHEDPGQATLSTTHPEGPVPATSA
PETVTAASSQAEKAIPSKSLLDWLRQQSDYSLEVPGFGTNFSDKPKQRRPRCKEPGKLDI
NFLNGEERVPAVPKEPGPRGFLPENKFNHSLTEPVLRDAGPRRRGRRPRSELLKAPAIVT
DSPSGMGPLFMNGLIAGMDLVGLQNMRNMPGIPLTGLVGFPAGFATMPTGEDVKSTLSML
PMMLPGMATVPQMFGVGGLLNTPMTTTCTSPAPASLSSTTKSGTAVTEKTAEDKPSSRDV
KTDTLAEDKPGPSPFSDQSEPAITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPT
LQQARHSEFVGLESQKRKKKKTKGDNPHPHPEPAPRSEREPSSNQNCTEASAPLPPDREH
VAQAGDGGPKDSNNNTN
NT seq
8154 nt
NT seq
+upstream
nt +downstream
nt
atgataatgaaaatacagaagaaagagaagcagttgtcaaatttcaaagttttgaatcac
tccccaatgtctgatgcctctgtcaattttgactacaaatccccatctccttttgactgc
agtactgatcaggaagagaaaattgaagatatttctagtcagtgtctgccccagaaggac
ctgtatgctactgaagaggaagctgatacccttttccctaggaaaatgacatcccataat
gggatggaggacagtggaggaggaggcactggagtgaagaagaaacggaagaaaaagaat
ccaggagagcaggaaggtgcagcaaagggaagcaaggacagggagcccaagccaaagagg
aagcgagagcctaaagagccaaaggaacctaggaaggctaaggagccgaagaaggccaag
gaacccaaggagccgaagcagaaggatggagcaaagaaggcacggaagccccgagaggcc
tcgggcactaaggaggccaaagagaagaagagcggagctgactcagcagccaggacaaag
tccagaaaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaaa
aggaaaagtgaaaccacagtggagagtttagagctggatcagggcctgccgaactcatcc
ctgcggagtcctgaggagtccactgagtctgcagacagccagaaacgacgctcaggacgg
caagtgaagcgcagaaaatacaacgaggatctggacttcaaagtggtggatgatgatggg
gaaacaatcgctgttcttggagctggccgaacatccgccctctcggcttctacactggct
tggcaggtggaggagcctcctgaagatgatgcaaacatcatcgagaagatcctggcatct
aagacagtccaagaggttcaccctggagaacccccatttgacttggagctattctacgtt
aagtatagaaatttttcctacttacattgtaaatgggccacaatggaagagctcgagaag
gatcctcgcatcgcacagaagatcaagcgatttaggaataaacaagcccagatgaagcac
atttttactgagcctgatgaagacttgttcaatccagactatgtagaagttgatcgcatc
ttagaggtggcccacaccaaggatgcagaaacaggagaggaggtgacacattacctggtg
aagtggtgctcactgccatatgaagaaagcacgtgggagctagaggaagatgtggatcct
gcaaaagtgaaagaattcgagtctcttcaagttctccctgaaattaagcacgcggagcgg
cctgcttcagactcatggcagaaacttgagaagtctcgcgagtataagaacagtaaccag
ctccgggagtaccagctggagggaatgaactggctcctttttaactggtataacagaaaa
aactgtattttagctgatgagatgggcctagggaaaaccatccagtccatcacattcctt
tcagaaatattcctaaggggaatacatggccctttcctcatcattgcccctctctccacc
atcactaactgggagcgggagttccggacatggactgagatgaatgctatcgtgtaccac
ggcagccagatcagcaggcagatgatccagcagtatgaaatggtgtacagagatgcacag
ggaaaccccctttcaggagtcttcaagttccatgttgtcatcacaacatttgagatgatc
ctagcagattgcccagagctgaagaagattcactggagctgtgtgataattgatgaagcc
cacagattgaagaataggaactgcaaacttctggagggcctgaagctcatggccctggaa
cataaagtgctgctcactggaacgcccttgcagaattctgtcgaggagctcttcagtctg
ctaaattttctggagccatcacagtttccttcagagacggccttcttggaggagtttgga
gacctgaaaacagaggagcaggtgaagaaactgcagtctatcctaaaaccaatgatgctt
cggcggctgaaagatgacgtggaaaagaatcttgctcccaaacaagagacgatcattgaa
gtggagctgactaatatccagaaaaagtattaccgtgccatcttggagaagaacttttcc
ttcctggccaaaggggcaaatcagcacaacatgcccaatctcatcaataccatgatggag
ctgagaaagtgctgtaaccatccttacttaatcaatggggcagaggagaaaatcttagaa
gatttccgaaaaacccacagccctgatgcttctgactttcagctgcaggccatgattcag
gcagcagggaagctggtgctgattgataaactgctccctaagctgattgctggtggccac
aaagtactcattttctcccagatggtgcgctgccttgatatcctggaagattatctcatc
cagagaagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggca
gccatcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccaga
gcgggaggcctggggatcaatctcacagctgctgatacctgcatcatatttgattcagac
tggaacccacagaatgacttgcaggctcaggcccgatgtcatcggataggccagagcaaa
gctgtgaaagtgtatcgcctcataactcggaactcctacgagcgggaaatgtttgacaag
gccagcctaaagcttggtctagacaaggctgttcttcaggacatcaaccgaaagggcagc
accaacggcgtacagcagctctcaaaaatggaggtggaggacttgctccggaagggtgct
tatggagccttaatggatgaggaagacgaaggctccaagttctgtgaagaagacatagac
cagattctgcagaggagaactcataccatcaccatccagtctgaagggaaaggatccact
tttgccaaggctagctttgtggcttcaggaaatagaacggatatttccttagatgaccct
aacttttggcagaaatgggctaaaatagctgaactggacactgaagcaaagaatgaaaag
gaaagtttggtgatcgaccggcctcgtgtgagaaagcagaccaaacactacaactccttt
gaggaggacgagctcatggagttttcagagttagacagtgactccgatgaaaggcccacg
agatcaaggcgcttgaatgacaaaaccaggcgctacctccgagccgaatgcttccgggta
gagaagaacctgctcatctttggctggggccggtggaaggacatcctgactcatgggcga
ttcaagtggcatctgaacgagaaagacatggagatgatttgccgtgccctgctggtgtac
tgtgtcaagcattacaagggggatgagaagatcaagagtttcatttgggaattgatcaca
cctaccaaagatgggcaggcccagaccctccagaaccactcagggttgtctgccccagtc
cctagaggaaggaaggggaagaagacgaagaatcagctgctactcccagaattgaagaat
gcagactggctggccacctgcaaccccgaggtggtcttgcatgatgacggctacaagaaa
cacctcaaacagcactgcaacaaggtacttttgcgagtccggatgttatactacctaaaa
gctgaaatactgggagaagcagctgataaagcatttgaaggagctccagccagagagctg
gaggtgtctctgcccgacatcgactatgtggagatcccagcagactggtgggatgctgag
gccgataagtcccttctgattggcgtgttcaagcatggctatgagagatacaatgccatg
cgagcagacccagcactttgcttcctggagaaagttgggatgccagatgagaagtctctt
tctgcagaacagggagtcacggatggaacctcagacattcctgaaagaggcaacatggat
aaggaagataatgctggggataaattagatggcctccagaaacaaatggagagttccagc
gatggaggtgatggcatttttggtgaaaagaaggatgacagccaggcagcccaggatggc
tccgagccagacagatcgccctggccagtttcctccgctctcacagctcgtctcagacgt
ctggtcactgtctaccagcgctgcaaccgcaaagaaccctgccggcctgaaattctgggc
ccaggtaaccaagcatactgggtccaggaagagatgttcaggagaacctcagaaatggac
ctcatcaacaaggaagcccaaaagaggtggactaggagagaacaagcagacttctacaga
acagtgtcttcctttggtgtggtttatgaccaggaaaagaaaacctttgactggacgcag
ttccgaagcatttcccgtttggacaagaagtcagatgagagcttggaacactattttcac
agctttgtggccatgtgccgaaacgtctgtcgtctgcccgcatggaaagatggtggcccc
ccagatcccaccatctacgttgaacccatcactgaggaacgggccgcaagagctctgtac
cacattgaacttttacggaaggttcgagagcaagtgctgaggtgtcctcagctgcacgag
cgcctccagctctgcaggcccagcctctacctcccggtctggtgggagtgtgggaagcac
gaccgtgacctgctcattggcaccgccaaacatgggctgaaccgcactgactactacatc
atgaatgacccccagctgtccttcctggatgcctacagaaactatgcccagcataaaaga
actgatacccaggcaccagaaagtctctgttgcctttatcagaccaactccaaactatat
gaatctcttacatatactcagatgagtaggacctcggagtcttttgacaatgaacctgaa
aatctagtgaaaatagaaagcagagaggatcacctgggtcagcctgggggcagcttacct
gacattacttgtgaaaactttatttctaaagttcaggatgtgatttccatcaaccatgat
gaaagcctgctgcctgagtctttggagagtgtgatatacggtaaaacagtgttcagccaa
gagccaagctcttttcaggaaagcctgagcagttccaatgctgactccaggagagatgct
gttgctgtctcagcaagcaaagatggggactgtcagcctggtggccacgaggcagaaata
gcttcaggtccatcttttatgagtattttagaagcaggagtagctcaaataaacaataaa
aatggaaaacatttgttgatgtctatttcaaaggagagagaattctgctgcagtgaggca
gggcagagacctggaagcattaggcacctagaaaccaaatgcatggcctccccttccttg
gatcaaggaaatgaaagtgggtttgtagatatgtgtaatcttagtgtttgtgactccaaa
acaagtctgtcagcaaatcagcaattaattgatttattagaaaacaaaagtttagaaagt
aaattgattttgaaccacagcgatgaggaggaggaagaggagggaaatgaggaggaaaac
ttagatataccagcagacataaagaagccagaagttttacatctaacagagtccactact
actatcccaagggaaaagaaccgaggcttccatgtagatgaagccaagaaaggaagcttg
gaagcggtaagcctgagtactgggccacagagggcttttcccccagcagcctgtcagtgc
cactgcagacacatggagagatggaaggccagcattgagaacgatgactttgaagtcgag
aagcccaagggttataacccagacctgtacacaagcagagctaataatatcacagtggag
agcgagccagctgctattccatcagagccatttaaagtgaagcatgaacttttaaaagaa
ccctggaaagaaagtgcagaagggaagagaggtttccccatatatcctcttgaaagaagt
gaactcaagtcagaagacatgaactttgagaataaagatgattatgacagaaatggacac
tgccatagtcaagattatccagggagatactctgaagaggagagtaagagctcaacatca
ggcattgcgggagacgtcacggatgacctacaggaggtgcgggctcccaccattgctcag
ctgctacaggaaaaaaccctctactccttctcggagtggccaaaggatcgtgtgataatt
aaccgcctagataacatctgccatgtagtgttgaagggaaagtggccctccagtcagcag
tatgagccctcgggtacactgcccacccctgtattagccagcagtgctggttctcggaac
agcctctccgagccggaagcgtcagagcacggcttcagcaatggcgcagcattggtggcc
cagatccagaaggagagcttcttggctccagtattcacaaaggatgagcaacatcacaga
catccctatgagtttgaagtggaaagggatgcaaaggcccggagcttggaacagttctct
gccacccatgggcacccccctattgtcctcaatggctggcatggggagtcagctatagac
ctctcttgcacatcagaggggtccccaggagccacatctcctttcccagtgagcgccagc
acccctaagattgggacaatcagttcgcttcaaggagctcttggcatggacttgtctggg
attctacaggctggtctaatccatccagtgaccggacagattgtcaacgggagccttaga
agagatgatgctgccacgaggaggcggagagggagacggaaacatgttgaaggagggatg
gatctcatctttttgaaggagcaaacacttcaggcgggaatcttggaagttcatgaggac
ccagggcaggccaccctgagcaccacacaccctgaagggccagtgcctgctacctcagca
cccgaaaccgtcacagcagccagcagccaggccgagaaggccattcccagcaagagtctg
cttgactggctgaggcagcagtccgactactccttagaagttcctggctttgggacaaat
ttttcagacaaaccaaagcagaggaggccacgttgtaaggaacctggaaaattagacatt
aactttctgaatggagaagagagggttcctgctgtccccaaggagccaggaccaaggggc
tttctcccagaaaacaagttcaatcactccctgactgagcctgttcttcgagatgcaggc
ccccgcaggagggggaggcggcctcggagcgagctcctgaaagctcctgccattgtgaca
gactctccttctggaatggggccactgttcatgaacggactgattgctgggatggacctg
gtaggacttcagaacatgagaaatatgccaggcatcccactcactgggctggttgggttt
ccagctggctttgccacaatgcctacaggcgaagatgtcaaaagcaccttgagcatgcta
cccatgatgctgccgggaatggccacagtgccccagatgtttggtgttgggggactcctc
aatacgcccatgacaactacctgcacttcacctgctccagcgtctttatcaagcacaaca
aaaagtggtacggcggtgaccgaaaagactgcagaagacaagccaagtagccgtgatgta
aaaacagatactttagctgaagacaagcctggtcctagtccattttctgatcagtctgaa
cctgcaataactacgagtagtcctgtggcttttaacccatttcttatcccaggagtgtct
cctggactcatttacccatccatgtttctctcccctggcatgggcatggctctgcctacc
ctgcagcaggccagacactctgaattcgtaggtctggaaagccagaagaggaagaagaag
aaaacaaaaggggacaacccgcacccccacccagagcctgctcccaggtctgaaagggag
cccagcagcaatcagaactgcactgaagccagtgcacctttgcccccagacagagaacat
gtggcacaggctggggacggaggacccaaagactccaacaacaacaccaattag
DBGET
integrated database retrieval system
