Trichechus manatus latirostris (Florida manatee): 101361438
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Entry
101361438 CDS
T05135
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101361438
03015 mRNA surveillance pathway
101361438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101361438
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101361438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
101361438
NCBI-ProteinID:
XP_004378121
UniProt:
A0A2Y9DNT1
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSLARGGGSCSGSAEGGGSGSLSSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEDENSKVDLKSEAN
DAANSSTKEEKGEEKPDGKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSTPRNYSRSGGFKEGRAGFRPVEAGGPHGGRSGETIKHETNYRSRRLEQTLVR
DPSPEADAQVHGSPEKEEAASETPAPAPDTAPPAPDRPIEKKSYSRARRTRTKAGDAVKI
AEELPPPPEGLTPAPPMPETTPPPPAKTGNWEAPVDSTTGGLEQDMAQLNITEQNWTPGQ
PSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSSASLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPALY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcgtcggcagcgcgcttcgcaggacactgaagacgaggagtctggcgct
tcgggctcagatagtggcggctccctggcgcggggcggcgggagctgcagcggtagcgct
gaaggcggaggcagcggctctctttcttcgcagcgcggaggccgagctggggccctccat
ctgcggcgggtggagagcgggggggccaagagtgccgaggagtcggagtgtgagagtgaa
gatggcatcgagggtgatgctgttctctcagattatgaaagtgcggaagactcagaaggt
gaagaaggggagtacagtgaagacgaaaactccaaagtggacctgaaatcagaagccaat
gatgctgctaattcttcaacgaaagaggagaaaggagaagaaaaacctgatggcaaaggc
actgtcactggagagaggcaaagtggggatggacaggagagcacagagcctgtggagaac
aaagtgggtaagaagggccctaagcatttggatgatgatgaggatcggaagaatccagca
tacattcctcggaaagggcttttctttgagcatgatcttcgagggcaaacacaggaggag
gaagtcagacccaagggacgtcagcgaaagctatggaaggatgagggtcgctgggaacat
gacaagttccgggaggatgaacaggctccaaagtcccgacaggagctcattgctctttac
ggctatgacattcgctcagctcacaatcctgatgacatcaaacctcggagaattcggaaa
cccaggtttgggagtcctccacaaagagatccaaactggattggtgagcggccaaacaag
tcccatcgccaccagggtcctgggggcaccctaccaccaaggacgtttattaacaggaat
gctgccggtactggccgtatgtcgacacccaggaattactctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggaggctggtgggccacatggtggccggtctggt
gagactattaagcatgagactaattaccgatcacggcggctagaacagactcttgtgagg
gatccatccccagaagcagatgctcaagtgcatggcagtcctgagaaggaagaagcagct
tcagagacaccagctcctgctcctgacactgcaccaccggcccctgacagacccattgag
aagaaatcctattcccgggcaagaagaaccagaaccaaagctggagatgcagtcaagatt
gcagaagagttgccccctccaccagaggggctgaccccagcacctccaatgccagaaact
actcctcctccacctgctaagactggaaactgggaggctccagtggattctactacaggt
ggacttgagcaagacatggcacaactaaatatcacagaacagaattggactccggggcag
ccttcattcctgcagcctcgggaacttcgaggtatgcccaaccacatccacatgggcgca
ggaccaccacctcagtttaaccggatggaagaaatgggtgtccaaggtggtcgagccaaa
cgctattcatcccagcggcaaagacctgtgccagagccccctgccccccctgtgcatatc
agtatcatggaggggcattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagctctgcttcactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatcctcaccagacaccggcacctctgcccaatccagccctctat
cccccaccagtgtccatgtctccaggacagccaccaccgcagcagttacttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggg
gcactgcctcccccgccacctcctcatctgtatcctaatacacaggccccatcacaggta
tatggaggcgtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
cctcggaggactccccaaccagtcaccatcaagccgccaccacctgaggttgtaagcagg
ggttccagttaa
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