Trichechus manatus latirostris (Florida manatee): 101361565
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Entry
101361565 CDS
T05135
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101361565
03015 mRNA surveillance pathway
101361565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101361565
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101361565
mRNA cycle factors
P-body specific factors
101361565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
101361565
NCBI-ProteinID:
XP_023589375
UniProt:
A0A2Y9R1B1
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MRSEKEAAGGAGSTGAAVATRGSSGREKLSASAPRGGPAMEIQFRWESPRREPETQSAST
SGCGGSGSGAGKPREEKRTLLSKVVIRRLPPSLTKEQLEEQLHPLPAHDYFEFCTANLSL
YPHLYSRAYINFRNPDDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKISKKKLKKKDA
KTGSIEDDPDYKKFLEAYCKEEEKTSASPETLLGEIEAKTRELIGLFRSFLLSTVLRSRR
TTPLLEYIKNRKLEKQRIREEKREERRRRELERKRLREEEKRKRREEERSKRKEADKQKK
IVEKEIRFKDRPALQLYQPGARTQARLGSASNTCECGGTRTEESGDGRKYEADASPGAAS
KKSKEAE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggagaaggaggcggccggtggggccgggtcgaccggggctgcagtggctact
cggggctcgagtgggagggagaagctgtcagcgtccgccccccgcggagggccggccatg
gagattcagttccgctgggagtcgccgcggcgggagcccgaaacgcagtcggcctccacc
tctggctgtgggggtagcgggagcggcgcgggcaaaccacgcgaggagaagaggacgctt
ctgagcaaggttgtcattcggcggctccctcccagtctcaccaaggagcagctggaagag
cagctacatccgcttcctgcgcacgattattttgaattctgtactgccaatcttagtctt
tatcctcatctctactcaagagcatacattaattttagaaatcctgatgacatccttctc
tttagagatcgttttgatggatatatcttcattgacagtaaagggttagaataccctgca
gtggtagaatttgctccattccaaaagatatccaaaaaaaagctaaagaaaaaagatgcc
aaaacgggaagcattgaagatgacccagactataagaagtttttagaagcttactgtaag
gaggaagagaaaactagtgccagtcctgaaactcttctgggagagatagaggcaaagaca
agagagctcattggtctgtttcgctcatttcttctctctactgtattgagatctagaaga
accacgcctcttttggagtatattaaaaatagaaaattagaaaagcagcgaattcgagaa
gagaagcgagaagaacgaaggaggagggagttagaaaggaaacgcttgcgggaagaagag
aaaaggaaaaggagagaagaagaaagatctaagagaaaagaggcagacaaacaaaagaaa
attgttgagaaagaaataagattcaaggaccgcccagccctgcagttataccagccaggc
gctcgcacccaagcccgtttgggctctgcgagtaacacctgtgagtgtggtgggacgcgc
accgaggagagcggtgatgggcggaagtatgaggcagacgcctcacctggggctgcatct
aagaagagcaaagaggcggagtaa
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