Thermotoga maritima Tma200: THMC_0678
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Entry
THMC_0678 CDS
T03901
Name
(GenBank) metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
tmx
Thermotoga maritima Tma200
Pathway
tmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
THMC_0678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmx03019
]
THMC_0678
Messenger RNA biogenesis [BR:
tmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
THMC_0678
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
AKE26583
LinkDB
All DBs
Position
complement(691522..693090)
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AA seq
522 aa
AA seq
DB search
MRIEIFDGHRNIGGNKIRVVDSENDGFLLDFGLNFSRWGEFFEEFLNPRTGKILHDLLKL
KMVPRLNIYRDDLFDGKFEDPVNHAFLFLSHAHADHTGMVGLIDEKIPLLMTGETFAVMR
ASVYTSNSNVLTQLGGKKRRKVNDKDLENGIREDLTVSPGNSKNAEKLTRRVSFPKNIEF
NDDLTVVDVNSLWKNELFVEPVYHSVIGAAGLAARVDDLWLAYTGDFRTGPETAEEERYW
LDTLGEKRLALSLRTSRFFENLKDKRPLVLIVEGTRVTREENIENTEKDVFENAMRVFRG
TKNLILVDFPIRHLERLFTFLKVCMENDRRLVLMPKDYAYLLEMERVEPLWKLTDEERSF
VRVYHPGKVTYINLEKDALLRAREEGILLSPEEINLHPEKHTMVAGYWDFPHILDLDERV
LNGAVYIHSTSEAYTEEQEIDAKRFMNWLRYFNIIPFGIREVNGNIVFTKEFHASGHVSP
QGLEKILNELNPDYIVPVHTLNPGWFVERWGERVLLENVIVL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatagagatattcgacgggcacagaaacatagggggaaacaaaatcagagtggtt
gattctgagaacgacggttttcttctggatttcgggttgaacttttccagatggggagag
ttctttgaggagtttttgaaccccagaacaggtaagatccttcatgacctgctgaagctc
aaaatggttccccggctcaacatctacagagacgacctcttcgatggaaagttcgaagat
cctgtgaaccacgcctttctctttttgagccatgcgcacgcggatcacaccggaatggtg
ggcctcatagacgaaaagatccccctcctcatgaccggtgaaaccttcgcggtgatgaga
gccagtgtgtacacgagcaactcgaacgttctgactcagctcggtggaaagaaaagaaga
aaggtcaacgataaagatctggaaaacggaatccgcgaagacctcacggtgagcccggga
aattcgaaaaacgcggagaagttgacaagacgcgtttcttttcccaagaatatagagttc
aacgatgacttaacagtcgtcgatgtgaactctctgtggaaaaacgaactgttcgttgaa
cccgtgtaccactccgtcataggagccgcgggtcttgcggcaagggtggacgatctctgg
ctcgcctacaccggagacttcagaacgggtcccgagacagcagaagaagagcgctactgg
ctggacactctcggtgaaaagagactcgcactttccctcaggacctcgagattttttgag
aatctgaaggacaagcgcccgctcgttctcatcgttgagggaaccagagtcacgagggaa
gagaacattgagaacacggaaaaggacgtcttcgaaaacgcgatgagagttttcaggggg
acaaagaacctgatactcgtggattttcccatcagacacctggagaggctcttcaccttc
cttaaggtctgcatggaaaacgacagaagactcgttctcatgccaaaagactatgcctat
cttctcgagatggaacgagtggaaccactctggaagctgacggatgaggaaaggtctttc
gttcgtgtctaccaccccgggaaggtcacctacataaacctcgaaaaagacgcactgctt
cgagccagagaggaagggatccttctctcaccagaggaaataaacctgcatccagaaaaa
cacaccatggtcgcgggatactgggacttcccgcacatcctcgatctcgacgaaagagtt
ctgaacggcgccgtctatatccattcgacgagcgaagcctacacggaagagcaggagatc
gacgcgaagcgcttcatgaactggctcaggtacttcaatataattcctttcggcataaga
gaagtgaacggaaacattgtcttcacaaaagagttccacgcctcgggccacgtctctcct
cagggtctggaaaagattttgaacgaactgaacccagattacatagtgcccgttcacacc
ctgaatccgggctggttcgtcgagcgctggggtgaaagggtcttacttgagaatgtgatt
gtgttataa
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