Tetraodon nigroviridis (spotted green pufferfish): GSTEN00007899G001
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Entry
GSTEN00007899G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03022
Basal transcription factors
tng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTEN00007899G001
09124 Replication and repair
03420 Nucleotide excision repair
GSTEN00007899G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tng03021
]
GSTEN00007899G001
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00007899G001
Transcription machinery [BR:
tng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GSTEN00007899G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GSTEN00007899G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
DZR
Motif
Other DBs
NCBI-ProteinID:
CAF92597
UniProt:
Q4T3D5
LinkDB
All DBs
Position
undetermined
AA seq
395 aa
AA seq
DB search
MMDEEPERAKRWEGGYERTWEVLKEDESGSLKASVEEILFQAKKRRLVQSHGQVRLGMMR
HLYVVIDCSRSMEDQDLKPNRLTSTLKLMEGFVEEYFDQNPISQMGIITTKNKRAEKLTD
LAGNPKKHAAALKKAVDSACVGEPSLYNCLSLALQTLRHMPGHTSREVLIILSSLTTCDP
GNIYELIQTLKSLKVRVSVVGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVKPP
PASCSSECSLIRMAGFPQHTMASLTDQDAKPSFSMAHLEGGGGGPDLSLGGYFCPQCHAK
YTELPVECKVCGLTLVLAPHLARSFHHLFPLQVFPESSAEDPPKDRFCQACQGRLKDKSV
FTCPSCHSVFCVECDLFIHDSLHCCPCCIHRPSGP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgaagagccggagcgagccaagcgctgggagggaggctacgagcggacatgg
gaggtgctgaaggaggacgagtccggctctctcaaggcctcagtggaggagatcctgttc
caggccaagaaaagaaggctggtgcagagccatggacaagtgaggctggggatgatgcgc
cacctctacgtggtgatcgactgctccaggagcatggaagaccaggacctgaagcccaac
cgtctcacctccactttgaagctgatggaggggtttgtggaggaatattttgaccagaac
cccatcagccagatgggcatcatcaccaccaagaacaaacgagctgagaagctgacggac
ctggcggggaaccccaagaagcacgccgccgccctgaagaaggccgtggacagcgcgtgt
gtgggagagccgtccctctacaactgcctcagcctggccctgcagacgctcaggcacatg
cctggacacacgagccgggaggtcctgatcatcctcagcagtctgaccacgtgtgacccc
ggcaacatctacgagctgatccagaccctgaagtccctgaaggtcagggtgtccgtcgtc
ggcctgtcggcggaggtgcgggtgtgcacggtgctcaccagggagacgggcggctcctac
cacgtcatcctggacgagagccacttcaaggagctgctgatgctgcacgtcaagcctccg
cccgccagctgctcgtccgagtgctctctgatccggatggcggggtttccccagcacacc
atggcctcgctcacagaccaggacgccaaaccgtccttcagcatggcgcacctggagggc
ggcggcggcggccccgacctgtccctgggggggtacttctgtccacagtgtcacgccaag
tacacggagctgcccgtggagtgtaaagtgtgcggcttgactctggtgttggccccccac
ctggccaggtccttccaccacctcttcccccttcaagtctttccagagagctctgcagag
gatcctccaaaggacaggttctgccaggcttgtcaagggcggctgaaggacaaaagtgtg
ttcacctgcccctcctgccacagcgtcttctgtgtggagtgtgatctcttcatccatgac
tcgctccactgctgcccctgctgcattcaccgcccgagcggcccctga
DBGET
integrated database retrieval system
