Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014164G001
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Entry
GSTEN00014164G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tng03000
]
GSTEN00014164G001
Transcription factors [BR:
tng03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
GSTEN00014164G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-ProteinID:
CAF96949
UniProt:
Q4SQY3
LinkDB
All DBs
Position
11
AA seq
370 aa
AA seq
DB search
MTASNRGVIWHRKAGKASPSKGESGVVAVGRVGVRAGSILEASDRGDVSMAGVGVKIEQE
ESCSGRGLTTSMETLKASPSRDWSGSHPLEVRQLTPPLSCSPSDGSPVIPTIEKLLNADW
KEKLLDKSTVVAGQLKGTPESLAEKELQLVNMPYVMIPAFHHQHATPPAVDYSMQLLQNP
HPTTVKRSSGAFRQEASQPLNLTSKPKGMELTKAQSPQSLEMGNLALQGAYRSRELHRDV
SHSPPRTALGGYAGPRPSPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGS
RWKGMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSR
RQEQRATYTH
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgactgccagcaaccgtggtgtcatctggcacaggaaggctggtaaggccagcccttca
aaaggagagagtggggtggtggcggtgggccgggtaggtgtcagagctggatctattttg
gaggcgtccgacagaggggatgtcagcatggcaggcgttggtgtcaaaatagagcaggag
gagtcttgcagcggacgaggactcaccaccagcatggaaactctgaaggcgtctccctca
cgtgactggtctggaagtcatccgctggaggtccgccagttgacgccgccgctctcctgc
tctccttcggatggatctccagtcattcccaccatcgagaagttgctgaatgctgactgg
aaggagaaacttctggataaaagcacagtggttgccggacaactgaaaggtaccccagag
tctctggctgagaaggagctgcagttggtgaacatgccctacgtgatgatccctgccttc
caccaccagcacgcaacccctcccgctgtggactactccatgcagctgctgcagaaccct
catcccaccactgtgaagaggagcagcggagccttccgacaggaagccagtcagcccttg
aatctgacctccaagccaaaggggatggagctgacgaaggcgcaaagtccacagagcctg
gagatgggcaacctggccctgcaaggagcctacaggtccagagagcttcacagagacgtg
tcccacagccccccacggactgccctcggtggctacgcggggccccggccctcgccctcg
tcgggccacataaagcgacccatgaatgccttcatggtttgggccaaggatgagcgcagg
aggatcctgcaggcttttcctgacatgcacaactcctccatcagcaagatcctgggctcc
aggtggaagggcatgtccaaccaggagaagcagccctactacgaagaacaggcccggctg
agcaggcagcacctggagcgctaccctgactacaaatacaaaccccggcccaaacggacc
tgcattgtggagggacgaaggctgagagtgggcgagtacaaggccatgatgaagagccgg
cggcaggagcagagagcgacctacacacac
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