Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014642G001
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Entry
GSTEN00014642G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14316
nuclear pore complex protein Nup121
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00014642G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00014642G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTEN00014642G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-ProteinID:
CAF97317
UniProt:
Q4SPW5
LinkDB
All DBs
Position
7
AA seq
715 aa
AA seq
DB search
PGRFTITPQRHYPLQQPGFSSLGVLPLFRWDRFRKKVILTPRNSPGVRSPVTVRIARPDH
HTSPSIGHSVDHLSCAGLSKSPVDPCSRESVLKVLRETRKRPVEDEDRSFTTEQKIKGRR
NDSGGSAHSAFKPFLPNGTPSQLVPQPGSLKCGMISPMEEPTIKRSRTSSISSGAGIHAP
RGTPGTTRNAIHSSFSSTLGLSQRKRSAPSSSVSSPGSSRSQTAGGALKRPRREEGQSLS
SASSVKSDQAISEKAPVPFPKVPVTSSADSTSSGGAKKRKIPLVPRYRDDVIYMPSPPQL
GYRITAKDLDDEKMAAIKRIQKMLETPIIDLDPSPATSVGMVPAASTPLLEALKMKSASP
FSSASTVSMAAGTSGPFGLIGQSTTPASFSNPVSAVASTSSVSSATSSNPLLASGFKPIF
AVPPTATPPTTSAPDVKPSVQTFKPIFGGSAAGAGFRSSPVTAANPASTLSSNITSSLFG
SISSTTVAPSIFSSMTNPLAGATSTNAVGTTPTANQPALKSLFGNWTTPTSASTGSVPAL
VPNTGSAFQFGAAATSSSSSSSSSTSTSTTAPVPTAATTSSSNSTFIYYTTFGATQPDPQ
AAKQKVFAFGQVAPSQNTTGASFGGFSAASTAIAAAATAAPPAFSFGKPSFQAPTTQAVF
GSTTQATFGSTASQPPKPFAFGGAGTSSTPASNAAPAQFTFGAAAATTTTSFVTP
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
ccgggaaggttcaccatcaccccccagcgtcactaccccttgcagcagccgggtttctcg
tcattgggagtcctccccctattcagatgggatcgcttcaggaagaaggtcatcctcact
ccacgtaactccccaggtgtccgcagccctgtcaccgtgaggatcgcaaggcctgaccac
cacactagccccagtattggtcacagtgtggaccatctgagttgtgcgggcctgtctaag
agccccgtggatccctgctcaagggaaagtgtcctcaaggtgttgagagaaactcgcaag
agacctgtagaagacgaggacagaagcttcacaactgagcagaaaattaaaggaaggcgt
aatgacagcggggggagtgcacactctgcttttaagccattcttgcccaacggaacgcca
tcacagctggttccccaaccagggagcctgaaatgcgggatgatctcgccgatggaggag
cccacaattaagaggtctcgcacatcttctattagctccggcgctggaatccatgcacca
agaggaaccccgggcaccacacgaaacgccatccacagctccttcagctctacgttaggc
ctcagccagaggaaacgatcagcacccagttcctcggtgtccagccccgggtcatctcgc
tcccagaccgcaggaggggctttaaaaagacccagaagagaggaagggcagtctctgagc
tcagcgtcttcagtgaagtcggaccaggcgatctccgagaaagcgcccgttcccttcccc
aaagtcccagtcacctcctccgctgactcaaccagtagtggtggggcaaagaaacggaag
atcccgttggtccccaggtacagagacgatgtcatctacatgccctcacctccccaactg
ggctataggatcacggcgaaggacctggatgacgagaagatggctgccatcaaaaggatc
cagaagatgctggagacacctatcatcgacctagacccaagcccagccaccagtgtgggt
atggtcccagcagcctccaccccgctgctggaggctctgaaaatgaagagcgcttctccc
tttagctctgcatctactgtcagcatggctgcgggaacctctggaccctttgggctgata
ggccagagtaccacccccgcgtccttttccaatcccgtctctgccgttgcctcaaccagc
agcgtctcctccgccaccagcagcaaccctctgttggcttcagggttcaagcccatcttc
gccgttccccccaccgcaacccctccaaccacgtcggcgccagacgtcaaaccttctgtg
caaacgttcaaacccatctttggaggctccgccgcgggagccgggttccggtcttctccc
gtcacggcagcaaacccagcctccacgctttcctccaacatcacatcatccctctttggc
tccattagcagtaccacggttgctccctccattttctctagcatgaccaaccccctcgct
ggcgcaacctccaccaacgctgtcggcaccacgcccactgccaaccagccggctttaaag
tcgctctttggaaactggaccacacccacctcagcaagcactggttcagtcccagcactg
gtgccgaacactggaagcgcatttcagtttggggccgccgccacctccagctcctcctct
tcctcttcctccacctccacctccaccacagcccccgtccccactgctgcaaccacgagc
tccagcaacagcaccttcatttactacactacatttggagctacgcaaccagaccctcaa
gcagcaaagcagaaggtctttgcctttggccaggtggcacccagccagaacaccacgggc
gcctcttttggggggtttagtgcggccagcactgccatcgccgcagctgcgaccgccgct
ccgcctgcctttagctttgggaagccatcgtttcaggcgccaaccacgcaggctgtgttt
ggctcaacaacacaggcaacatttggctccacggcgtcacaacctccgaaaccgttcgca
tttggaggcgcaggcacgtcgtccacacctgcctccaatgctgctccggcccagttcacc
tttggcgcagctgctgccaccacgaccaccagctttgtgacccca
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