Tetraodon nigroviridis (spotted green pufferfish): GSTEN00017875G001
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Entry
GSTEN00017875G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K06809
cadherin 15, M-cadherin
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
GSTEN00017875G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tng04515
]
GSTEN00017875G001
Cell adhesion molecules [BR:
tng04515
]
Cadherins
Major cadherins
GSTEN00017875G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Big_9
LPAM_2
Motif
Other DBs
NCBI-ProteinID:
CAF99705
UniProt:
Q4SI27
LinkDB
All DBs
Position
5
AA seq
797 aa
AA seq
DB search
PRVLHPWRHRGRGLARVRRDWIIPQIRVLENSKQVPEALVQIKSDKIFTGEVIYKLEGPG
VDQEPKNLFEIDDKSGVIRSKQPLDREKHSSFTLKAFALSPSGERLENPTTIEIVVLDQN
DNRPVFTQSQFVGAVSEFSVPGTSVMSVSATDADDPTTENAILSYSIIGQESLPPNAVTK
VMFGINNETGTIYTRDVGLDREVVKSFRLRLQIADMSGQGLTSEGVAIIQVSDINNHAPQ
FSPAAVSPSWISRVVTMSTSRSLILFFFFCVWRLQYSFKAVENRKSYEVGRVNVTDRDDP
GTGNWEAKYSILNDQDGNFDIRTDPVTNQGLLTVVKPLDFEARSEYSLKLRVENVNALSS
KAQNPPVSTAAVRVTVVNQNEAPHFSEDPVLIVVPESVPPGTLLKSNYVSDPDNSELRFE
ISRDPERWLDINRVTGDITAKRSFNMRSPHVRNNVYRAVVKVTDAEGLSTSGGVSITLKE
TNDFPPQVVPGGGFVCKEATPEASGLVVTAVDQDFPPHAAPFRFEIPDDLPVNWTLSQLN
TTHAVLHPLVQLEEGEYAVPLLVSDSGRPALSSFTHVNVSVCLCDPSGDCKSAAGAVLGS
SVGLSFIALIIVTASVALLLLLLLLAAAVSACGRRHRLRKDTGLLVGESEDDVRDNVFNY
DEQGGGEEDENAFNIDLLWNPHDAPPTPGSYYPTPGFPRGKQPLRRDAPHNLPSPVYPRR
PPADPTDIEDYINDGLQAADGDPNVPPYDTALIYDYEGEGSLAGSLSSIASGSSDGDQDY
DYLNDWGPRFQKLAHMY
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
ccacgtgttctccacccatggaggcatcggggccgggggctggccagggtcaggagagac
tggatcatccctcagatcagggtgctggagaacagcaagcaggtccccgaagccctggtc
cagatcaaatcagacaagatctttaccggcgaggtgatctacaagttagagggcccaggg
gtggaccaggagcccaagaatctgtttgagatcgacgacaaatcgggagtaatcaggagc
aagcagccgctggacagggagaaacacagctccttcacgctgaaggccttcgcgttgtcc
cccagcggagagaggctggagaaccccaccaccatagaaatagtggtcctggatcagaac
gacaacaggcccgtcttcacccagagccagtttgtgggcgcggtctcggagttctcagtc
ccaggcacatctgtgatgtcggtgtcggccactgacgcggatgatccgaccactgaaaac
gccattctgagctactccatcatcggccaggagagccttccccccaacgccgtgaccaag
gtcatgttcggcatcaacaacgagacaggaaccatctacaccagagacgtgggcctggac
cgagaggtggtgaaaagcttccggctgcggctgcagatcgctgacatgtcgggtcaggga
ctaaccagcgaaggtgtggccatcattcaggtgtctgacatcaacaaccacgctccacag
ttcagccccgccgctgtgagtcccagctggatcagccgcgtggtgaccatgagcacgtct
agatctctcatcctctttttttttttttgcgtttggcggttgcagtacagttttaaagca
gtggaaaacaggaagagctacgaggtcggccgcgtgaacgtgaccgacagggatgacccc
ggaacgggaaactgggaggccaaatactccattttaaatgaccaggatggcaactttgac
atccgtacagatcctgtcacaaaccagggtctcctgacagtggtgaagcctctggatttt
gaagccaggagtgagtacagtttaaaactgagggtggaaaatgtcaacgctctcagcagc
aaagcccagaaccctccggtgagcaccgcggcggtgcgggtgacggtcgtcaaccaaaac
gaggccccacatttcagcgaggaccctgtactgatcgtggttcccgagtcggtgcctccg
gggactttgctgaagagcaactatgtttctgaccccgataactcagaactgaggtttgag
atcagcagagatcctgagaggtggctggacatcaacagagttacaggagacattactgca
aaaagaagcttcaacatgagatccccgcatgtcaggaacaacgtatacagagccgttgtc
aaggttacggacgccgaaggcctgtcgacctccggcggcgtgagcatcaccctgaaggaa
accaacgactttccccctcaggtggtccccggcggcggttttgtgtgtaaggaagcgact
ccggaagcttctggtctggtcgtgacggcggtggatcaggacttccctccccacgccgct
cctttccgcttcgaaatccccgacgacctgccggtcaactggaccctttcccagctgaac
accacgcacgccgtcctccacccgctggtgcagctggaggagggcgagtacgccgtcccc
ctgctggtgtcggactccggccgcccggctctgagctccttcacccacgtcaacgtcagc
gtgtgcctgtgcgatccctccggagactgcaaatctgcggccggagccgtgttgggctcc
agcgtgggcctcagcttcatcgccctcatcatcgtcacggccagcgtggcgctgctgctg
ctgctgctgctgctggctgcggccgtgagcgcctgcgggcgccgccaccgcctcaggaag
gacacggggctgctggtgggcgagtcggaggacgacgtccgcgacaacgtcttcaactac
gacgagcagggagggggcgaggaggacgagaacgccttcaacatcgacctgctgtggaac
ccccacgacgccccccccaccccgggctcctactacccgacgccgggtttcccgcggggg
aagcagccgctcaggagggacgccccgcataacctgccctcccccgtctacccccggcgg
ccccccgcagaccccacggacatcgaggactacatcaacgacggcctgcaggcggcagac
ggggaccccaacgtgcccccgtacgacacggccctgatctacgactacgagggggagggc
tcgctggcaggcagcctcagctccatcgcctccggcagctccgacggagaccaggactac
gactatctcaacgactgggggccacgcttccagaaactggcccacatgtac
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