Tetraodon nigroviridis (spotted green pufferfish): GSTEN00025283G001
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Entry
GSTEN00025283G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00025283G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSTEN00025283G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
Pre-60S particles
Helicases
GSTEN00025283G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMP24_GP25L
DEAD
Helicase_C
ResIII
Helicase_C_2
TerD
Motif
Other DBs
NCBI-ProteinID:
CAG05307
UniProt:
Q4S225
LinkDB
All DBs
Position
undetermined
AA seq
493 aa
AA seq
DB search
MFTLSELVVLMAVLSATASGYFVSIDAHAEECFYERVNSGTKMGLMFEVAEGGFLDIDVE
ITGPDGKQIYKGDRESSGKYSVAAHMDGTYKFCFSNKMSTMTPKIVMFTIDIGEAPKGQD
METEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVL
VAMTLGQIYYLKRFFEVTGSGKTLAFVIPIIELLLKREEKLKKMQVGALVITPTRELALQ
ISQVMEQFLQRFPQFTQILLIGGSNPIEDVEKFKDQGANIVIATPGRLEDMFKRKADGLD
LACWVKSLEVLVLDEADRLLDMGFEASLNAILGHLPKQRRTGLFSATQTQELEKLVRAGL
RNPVRITVKEKGAAASAVQKTPSRLSNYYTICRSEDKFNHLVAFLRQHKHEKNLVFFSTC
ACVEYFGRALETLIKKANVCCIHGKMKDKRNKIFAEFRSLKSGILVCTDVMARGIDIPDV
NWVLQYDPPSSAR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgtcggagctggttgtcctaatggccgtcctgtctgctactgcgtccggc
tacttcgttagcatagacgcccatgccgaggagtgcttttacgagcgggtcaactccggc
acaaagatgggcctcatgtttgaggttgccgaaggtggcttcctcgatatcgacgttgag
ataacaggacctgatggaaagcagatttataaaggcgacagagaatccagtggaaagtat
tctgtggcagcacacatggatggaacctacaagttctgtttcagcaacaagatgtccacc
atgacgcctaaaatcgtcatgttcacaattgatattggagaggcccctaaagggcaggac
atggagacagaagctcaccaaaacaaattggaggagatgatcaatgaattggctgttgcc
atgacagctgtaaagcatgagcaggagtacatggaggttcgagagaggatacacagagca
atcaatgacaacacaaacagccgagtggtgctttggtccttcttcgaagctctggttctg
gtggcaatgacactcggacagatttactacctgaagagattttttgaagtgactgggagc
ggaaaaacactcgcgtttgtcattccaataatagagcttctcctaaagcgggaggagaag
ttgaagaagatgcaggtgggggccttggtgatcacccccaccagagaactggctcttcag
atcagccaggtgatggaacagtttctccagaggttcccgcagttcacgcagattttactg
attggcggcagtaatccgatagaagatgtggagaagttcaaggatcaaggagccaacatt
gtaattgcgactccaggacgtctggaggacatgttcaagaggaaggcggacggcctggac
ttggcctgctgggtgaagagcctggaagtgctggttcttgatgaggctgacaggctcctg
gacatgggtttcgaagccagtctgaacgccatcttgggccacctgcccaagcagagacgg
accggcctgttttcagccactcagacgcaggagctggagaagctggtgagagccggactc
aggaatccagtccgcatcaccgtcaaggagaagggcgcggccgcctctgccgtccagaaa
accccctccagactctccaactactacaccatctgcaggtcggaggacaagttcaaccac
ctggtggcttttctgaggcagcacaagcacgagaagaacctggtcttcttcagcacctgc
gcatgcgtggagtatttcggccgagcgctggagactctgataaagaaggccaacgtctgc
tgcatccacggcaagatgaaggacaagcgcaacaagattttcgccgaatttcggagcttg
aaaagtgggatcctggtgtgcacggatgtgatggccagaggcatcgacattcccgatgtt
aactgggtgctgcagtacgacccccccagcagtgccaggtga
DBGET
integrated database retrieval system
