Tetraodon nigroviridis (spotted green pufferfish): GSTEN00025800G001
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Entry
GSTEN00025800G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tng03009
]
GSTEN00025800G001
03036 Chromosome and associated proteins [BR:
tng03036
]
GSTEN00025800G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSTEN00025800G001
Ribosome biogenesis [BR:
tng03009
]
Eukaryotic type
Pre-60S particles
Helicases
GSTEN00025800G001
Chromosome and associated proteins [BR:
tng03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
GSTEN00025800G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Menin
Motif
Other DBs
NCBI-ProteinID:
CAG05691
UniProt:
Q4S0Z1
LinkDB
All DBs
Position
5
AA seq
727 aa
AA seq
DB search
MDTAADFKIPKDKIKNVMKLKMKLKKEEEIEKEDKECEKAAAKKKKKKDKVTADQENGHM
DEATDMNGNSNTETPPKKKTKKNSQANTEKKLLKQKNESAEIAMNGHSNGKAPQLGHHPR
HHPRHHPRHHPRHHPRHHPRHHPSRVRNRPVTVRRKLRHQSREKEHFPTSESPQLQSANY
KVKTFDPVYDGEDVIAQARTGTGKTFSFAIPLVEKLQGDSAAPARGRAPKVLVLTPTREL
AIQVAKDFKDIIKKLSIVCFYGGTSYMPQIEAIRNGIDILVGTPGRIKDHLQNHKLDLSK
LKHVVLDEVDQMLDMGFAEQVEEILALSYKKDADTNPQTLLFSATCPPWVYDVAKKYMRP
SCKHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIRVYSGSHGRAIVFCETKKEAN
ELALNASIKQNAQSLHGDIPQKQRETTLKGFRKGSFEVLVATNVAARGLDIPEVDLVVQC
SPPKDVESYIHRSGRTGRAGRTGICICFYQRKEEDQLRYVENKAGITFRRVGVPTANDII
KSSSKDAVRFLDSISVAAIGYFREAAEKLIEEKGAVDALAAALAHISGATALEQRSLLSS
DAGYTTLQLTCSLEMHNIGYAWKTLKEQLGEQIETHIHRMTFLKGKTGVCFDVPVDKVKE
IQDNWKDCRRWQLTVATELPDLEVKPSRGRGGFRGGRGRSSGVFRNGNSGAGNKRGGQKR
SFSRAFN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacacagcagcggatttcaaaattccgaaggacaagatcaagaatgtcatgaagctg
aagatgaaactgaaaaaggaggaagaaatagagaaggaggataaagaatgtgaaaaagcc
gcagcaaagaaaaagaaaaaaaaagacaaagtgacagcggaccaagagaacggccacatg
gatgaggccacagacatgaatggaaacagtaacactgaaacaccaccaaagaagaagact
aagaagaacagccaagcaaacacagagaaaaagctgctaaagcaaaaaaatgagagtgcg
gagatagcaatgaatgggcattccaatggaaaggcaccccagctgggacaccatcccaga
caccatcccagacaccatcccagacaccatcccagacaccatcccagacaccatcccaga
caccatcccagtcgagtgaggaatcggccagtgacagtgagaaggaaactgagacaccag
agcagagagaaggagcattttccaacttcagaatctccccagttacaatcagcaaactac
aaggtgaagacgtttgaccctgtgtatgatggcgaggacgtgattgcccaggcccgaaca
gggacggggaaaacgttctcctttgccatccctttagtggagaaactccagggggattca
gcggcgcccgctcgaggccgggctcccaaggtcctggtcttaactccaaccagagaattg
gccatccaggtcgccaaagacttcaaagacatcatcaagaagttgtctatagtttgtttc
tatggcggcacctcatacatgcctcagattgaagcgatccgcaatggaatcgacatcttg
gtcggcacccccggtcgcatcaaagaccaccttcagaatcataaattagacctctcgaag
ctgaaacacgtggttctggatgaagttgaccaaatgttggacatgggatttgcagaacag
gtcgaggagattttggccttgtcatataagaaagacgctgacaccaatccacagactctg
ctgttttcggccacatgtccaccctgggtttacgatgtggctaagaaatatatgagacca
tcttgtaaacatgtcgatttgattggcaagaaaacacagaaagctgcaacaactgtagag
catctggccatagcgtgccactggtcccaacgtgcagctgtgatcggtgacgtcatccgg
gtgtacagcggcagccacggcagagctattgtcttctgtgaaacaaagaaagaggccaat
gaacttgcgttgaatgcgtccattaaacagaatgcccagtccctccacggtgacattcct
cagaaacaaagagaaaccacactgaagggcttcaggaagggctctttcgaggttctggtg
gccaccaatgtggcagctcgtgggttggacatcccagaagttgacctggtggtccagtgt
tctccaccaaaggatgtggagtcttacatccatcgatccggacgtacaggccgagctggc
aggactggaatctgcatctgcttctaccagaggaaagaggaggaccagctccgctacgta
gaaaacaaagcgggcatcactttcagacgcgttggtgttcccactgccaacgacatcatc
aagtcatcaagcaaagatgctgtcaggtttctggattctatttcggttgcagccattggt
tactttcgggaagcagctgagaagctgattgaagagaaaggagccgttgacgcgctggca
gctgctctggctcacatctctggagctacagctctagagcagagatcgctgctcagctcc
gatgcaggttacaccacgctacagctgacgtgctctttggagatgcacaacattggatat
gcctggaaaaccctgaaggagcagcttggagagcagatagagacccacattcacaggatg
actttccttaaaggcaaaacaggagtttgtttcgacgtccctgttgacaaagtcaaggag
attcaggataattggaaggattgtcgccggtggcagctgactgtcgctacagagctcccg
gacctggaggtaaaaccgtccagaggacgaggcggtttcagaggcggaagaggacgaagc
tctggggttttcagaaacgggaacagcggcgccggcaacaaaaggggaggccagaaacgc
agcttcagtcgggcgtttaat
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