Thioalkalivibrio nitratireducens: TVNIR_1929
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Entry
TVNIR_1929 CDS
T02408
Symbol
rmlC_[H]
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tni
Thioalkalivibrio nitratireducens
Pathway
tni00521
Streptomycin biosynthesis
tni00523
Polyketide sugar unit biosynthesis
tni00541
O-Antigen nucleotide sugar biosynthesis
tni01100
Metabolic pathways
tni01110
Biosynthesis of secondary metabolites
tni01250
Biosynthesis of nucleotide sugars
Module
tni_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
TVNIR_1929 (rmlC_[H])
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
TVNIR_1929 (rmlC_[H])
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
TVNIR_1929 (rmlC_[H])
Enzymes [BR:
tni01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
TVNIR_1929 (rmlC_[H])
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
CK_II_beta
Motif
Other DBs
NCBI-ProteinID:
AGA33590
UniProt:
L0DX97
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Position
1953267..1953833
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AA seq
188 aa
AA seq
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MIVTAMRIPEVLRIEPKVFGDPRGYFMESYHAARYAEFGIPAAFVQDNVSASGRGILRGL
HLQNPHPQGKLVYVLEGEVFDVAVDVRVGSPTFGQWVGEYLSAANHRQLWVPEGFAHGFC
VTSERALFCYKCTDRYHPEAELSVRWDDPALGIDWPVREPRVSDKDAQAACLHAIDPAKL
PGYEGTAT
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgaccgcgatgcgcatccccgaggtgctgcggatcgaaccgaaggtgttcggc
gaccctcgcggttacttcatggaaagctaccacgccgcacgctatgccgagttcggaatc
cccgccgcattcgtgcaggacaacgtgtccgcgtctgggcgggggatcctgcgcggactg
cacctgcagaacccgcatcctcaagggaagctggtgtacgtgctcgagggcgaggtgttc
gacgtcgcggtcgatgtccgcgtgggttcgccaaccttcgggcagtgggtgggcgagtat
ctttctgccgcgaaccatcgccagctctgggttccggaaggattcgcccacgggttctgc
gtgaccagcgaacgcgcacttttctgctacaaatgcaccgatcgctatcacccggaggcc
gagctctccgttcgctgggatgatcccgcgctagggatcgactggccggtccgcgaaccc
cgcgtctcggacaaggatgcacaggccgcctgcctgcacgcgatcgatcccgcgaagctg
cccggttacgaaggaactgcaacgtga
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