Trichoplusia ni (cabbage looper): 113494405 Help Entry 113494405         CDS       T05757                                  Name (RefSeq) DNA ligase 1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism tnl  Trichoplusia ni (cabbage looper) Pathway tnl03030   DNA replication tnl03410   Base excision repair tnl03420   Nucleotide excision repair tnl03430   Mismatch repair Brite KEGG Orthology (KO) [BR:tnl00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     113494405    03410 Base excision repair     113494405    03420 Nucleotide excision repair     113494405    03430 Mismatch repair     113494405  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:tnl03032]     113494405    03400 DNA repair and recombination proteins [BR:tnl03400]     113494405 Enzymes [BR:tnl01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      113494405     6.5.1.6  DNA ligase (ATP or NAD+)      113494405     6.5.1.7  DNA ligase (ATP, ADP or GTP)      113494405 DNA replication proteins [BR:tnl03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     113494405  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      113494405 DNA repair and recombination proteins [BR:tnl03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      113494405    NER (nucleotide excision repair)     Other NER factors      113494405    MMR (mismatch excision repair)     Other MMR factors      113494405 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  113494405 NCBI-ProteinID:  XP_026728524 UniProt:  A0A7E5VJR0 LinkDB All DBs Position 5:complement(9394248..9402373) Genome browser AA seq 895 aa AA seqDB search MYSITKLIVACRIVRNVHASVRFNVLCHFLGTPRVSLTNTIMAQRSITSFFKVSPPKCEV KQEKPVVKQEADEKEDEEVRDNSPISNGKAQVTSKRPRLESSDSDTSIRKKSPTPTSGKK SKVKRQRIESSDSDSTCPQEPPASPDPPKSPPSPESEEKTVIKLEKSSPKKYASPKSKKK QPLKEPNPVKEVSPKRSKKQSPVEKKNKSPKQEVLFKKEKEEEKESKTEVKELVPEVDYN PAKANYHPVDDACWRAGAPVPYLALARTLELIEATSARLKIIDILSNYFRSVIVLTPDDL LPSVYLCLNQLAPAYESLELGIAETYLMKAVGQCTGRTVPQLRASVARAGDLGLVAQSAR STQRTMFPAPPLSARSVLAALRDIARMTGHASVDKKIKKIQSLYIACRHSEARYLIRSLE GKLRIGLAEQSVLAALGAAAARTPPGGDCLDAAKGKTPDEFKAIVDEHVLTIKSVYCECP NYERVVPALLQEGLRGLAGRCRLQPGVPLKPMLAHPTKQLAHIFDRFENEQFTCEWKYDG ERAQLHVPELEAGGGPDLSKAAIFSRNQENNTTKYPDVLGRLTSLLRPNVTSCVLDCEAV AYDVVNKQILPFQVLSTRKRKDASEADIKVQVCVFLFDLLFLNGEPLVRRPLLERRQLLR EHFNEVPGEWQQATSRDCSSLEDVQQFLEEAVRGSCEGLMVKALAGPHAHYDIARRSHNW LKLKKDYLDGLGDTLDVVVVGAYRGRGKRAGVFGGFLLACYEPEHEQYQSLCKIGTGFSD EDLQNLTKQLQEHVIEAPRPYYSFDPQHSADVWLAAARVWEVRAADLSLSPAHRAAIGRV HPDKGISLRFPRFVRVRDDKTAEQATSAAQIADMYLAQDQVRNSTTAKTNMDEFY NT seq 2688 nt NT seq  +upstreamnt  +downstreamnt atgtatagtattactaaactgattgttgcttgtagaatagtgagaaatgttcatgcatca gtaagatttaacgtgttgtgtcatttccttggtactccaagagtctcccttacgaacacg atcatggcgcagaggagtatcacctcattcttcaaggtatctcctccaaaatgtgaggtt aagcaagagaaacctgtagtcaagcaagaggcagatgaaaaagaagatgaggaggttagg gacaattcacctatcagtaatggaaaagctcaggttacatcaaaacggccaaggctagag agtagtgacagtgacacttctattaggaagaaaagtccaacacccacctctggaaagaaa agcaaagtgaaaagacagcgaatcgagagctctgatagtgattcaacatgtccacaagaa ccaccagcatcaccagatcctccaaaatcgccaccatcaccagaatcagaagaaaagact gtcataaaacttgagaagtcatcaccgaaaaaatatgcttcacctaagagtaagaaaaaa cagccgcttaaagagcctaatcctgtaaaagaggtgtctccaaagagatctaagaaacag agtccagttgaaaagaaaaacaagtctcccaaacaagaagttttatttaaaaaggaaaaa gaggaggagaaagagagcaagactgaagttaaggaattagttccagaggtagattacaat ccggcaaaggctaactaccatcccgtagatgacgcatgttggcgcgcgggtgcacccgta ccttacctggcgttggcgcgcactctcgagctcatagaagccacgtcggcgcgcctgaag atcatagacatcctgagcaactactttcgctccgtcatcgtgcttacaccggatgacctg ttgccaagtgtctacctgtgcctcaaccaattggctccagcttatgagagcttggaactg ggcatagcggagacgtacctgatgaaggcggtgggtcagtgcacgggccgcacggtcccg cagctgcgcgccagcgtggcccgcgcgggggacctggggctggtggcgcagagcgcgcgc agcacgcagcgcaccatgttccccgcgccgccgctgtccgcccggagcgtgctggccgcg ctcagggacatcgcgaggatgacaggtcacgcatctgtggataagaagattaaaaagatt caatctctgtacatcgcgtgcaggcactcggaagctcggtatcttatacggtctctggag ggcaagctgcgcatcggcctggcggagcagtccgtgttggcggcgctgggcgcggcggcc gccaggaccccgcccgggggggactgtctggacgccgccaagggaaagacgccggacgag tttaaggctatcgtggacgagcacgtcttgaccatcaagtccgtgtactgcgagtgcccc aactacgagcgcgtggtcccggccctgctgcaggagggcctgcgcgggctggcgggccgc tgccgcctgcagcccggagtgccgctcaagcccatgctggcacaccctaccaaacaactc gcacacatcttcgacagatttgaaaacgagcagttcacttgtgaatggaagtacgacggc gagcgcgcccagcttcacgttcccgagctggaggcgggcggagggcctgacctcagcaag gcagccatcttcagcaggaaccaggagaacaacaccactaaatacccggacgtgctgggc cggctgacgtcactgctgcggccgaatgttaccagctgtgtgctggactgtgaggcagtc gcctacgacgtggtcaacaagcagatcctacccttccaggtgttgtcgacgcgcaagcgc aaggacgcgtctgaggccgacatcaaggtgcaggtgtgcgtgttcctgttcgacctgctg ttcctcaacggggagccgctcgtgaggcgcccgctgctggagcggaggcagctgctcagg gaacacttcaacgaggtgccaggcgagtggcagcaggcgacctcccgcgactgtagctcg ctggaggacgtgcagcagttcctggaggaggcggtgcgcggctcctgcgagggactcatg gtgaaggcgctcgccggacctcacgctcactacgacattgcgcgacgctcacacaactgg ctcaagcttaagaaggactacctggacgggttaggtgatacactggacgtggttgtggtg ggtgcgtatcgcggtcgcggcaagcgcgccggagtgttcggcgggttcctgctcgcctgc tacgagcccgagcacgagcagtaccagtcgctctgcaagatcggtaccggcttcagcgac gaggacctgcagaacctcaccaagcagctgcaagagcacgtcatcgaagcgcccagaccc tactacagcttcgacccgcagcactccgcggacgtgtggctggcggcggcgcgcgtgtgg gaggtgcgcgcggcggacctgtcgctgtcgccggctcaccgcgccgccatcggccgcgtg caccccgacaaggggatctcgctgcggttccccaggtttgttcgcgtgcgggacgataag acggcagagcaggcgacctcggccgcgcagatcgccgacatgtacctcgcgcaggaccag gtgcggaactccaccacagccaaaaccaacatggacgagttctactga

DBGET integrated database retrieval system