Trichoplusia ni (cabbage looper): 113498608
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Entry
113498608 CDS
T05757
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tnl04515
]
113498608
Cell adhesion molecules [BR:
tnl04515
]
Immunoglobulin superfamily
DSCAM family
113498608
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Pur_ac_phosph_N
C2-set_2
C1-set
Sp38
Ig_C17orf99
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
113498608
NCBI-ProteinID:
XP_026734487
UniProt:
A0A7E5W1U4
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All DBs
Position
11:1426403..1515720
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AA seq
1652 aa
AA seq
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MKPILLIATILLAAVALGPHCSCAASTGTPPPHRLKRCWLVRMTFHSQEHLQEHLAVDTE
PNMWVTEGKKIHLASCHTERPMSSSPVADTSTPREDPEYSVFARMVEEIQKEVYKLSLIY
IKCEAWLACRQPHGDETADETIAICKYLYNAPEITYQEVRRCLILESKYKNETTPEPQTV
REKRSSESRPELVYTFIEQAVQPGAQVALKCSAVGEPFPRFRWSLDGQPIPAHLGAIIAE
GRENGPNGLSSSSNYVLSTLTLTSARVEHGGRYECRATNNHGSVAHAARLNVYGPPYIRA
MNPVKAVAGSEVTIWCPYYGFPIDSVKWEGGAGVDPRYQQMDGQLTITNVDRNRDKGGWT
CSVLTPGGELARREVQVTVVSPPVLSPIVFPPGLKSGDRAQLTCTVTSGDMPVYFSWLKN
MMPISSSLQVDERGAEFYSMLLFKSLTAAHSGIYTCVVTNTAGKANMSAELAIKVPPYWQ
IEPSDTAVLLNGSLTVSCEARGHPSPSIYWTKFSGSTETTLGGVSDPVVLSNGSLRLESA
RAEHSGKYRCRADNGVSPALSKVLTIHINEPARFETQSANVTAKLGDTVRLACVARGDSP
LATAWSHSGRALPNSDYRMSISETRSAEGLRSELVIERADRRDSGVYRCQASNPYGRSDH
FVHLAVQEPPEPPANFRVLETTSRSVRLQWRRPYDGNSPVLGYVVQYRKHDSSNTDSWRD
ADTHNVSVSAHNPDSYSETESATITGLEPATAYLVRARTVTAQFASAHTRALLALTLHEP
PSRAPIGLRASAPRSSTIELAWQAPPSSSWNGELLGYTVWWWPSADGTLAGGTNVGMEFA
TVRGQITKYIIEGLEHYTRYSVSVRAFNSAGAGPATAPVNTLTQESVPSEGPRAVRCRAV
SPQSLKVEWSPPPAHAHHGALLGYKLLYRPEHTAEWLEWEVRGNSGSSTGAGAEVKRVAG
VETLLLALRPHSNYTVQALAYTAAGDGVPAHPIHCTTQQDVPGSPAAVKVVATSVTSLAV
SWLPPSRPNGPLLYYTVFYRELGRDRPPQTTTVQVEDGDSFVGLGGSTELRSLSEGATYE
AWVSAHSAAGEGEPSAPQPATTTSRARARLLSFGVWARVQCGHSLRLACAWRGEPAPRAR
WLRGDRPVTHDPRTHLTPHGHLAIHEVDASTSGNYTCSARNTFGSEEVTYRVECAAPPAA
PTLSLDHAAHTDARLTWRTTHHPAAPPHGFTIWWVRVRDDTGDLESISSRSEEERRLETG
GEAASVVLRALSCGASYSVRAVAHSRAGSSPPSVPLMVKTKPPVLVWEGGGEDRLEEGAE
AAVWSNSSALALDARRAVRCGARLVRLQWRRADAASATVWRDADLTSLHHHREVVLGDLG
AGAWYALRLWTATESARHQAIIYAATTTHSGERLRRPVAFQSEGGQISTPSGNADTERVL
GAVSLAFAALAALAVTALLLVLVAKRTTLWPCGGADEEARRCSHSVASTDKSVCPEQQNI
RNCQHDYKHDKLSPASDVYEISPYATFAVGGEAAAATLDHTLQFRTFGHRDNDAPPHRPC
RKHPQRHRERAEVEKHLSECELQQLSRYEKVRPRHCAPTSYCVPLAHHGSGGGSGSGGGC
GSGGGLSEVYAGDSSAESGPGSLSPRTHHEHS
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatactgcttatagctaccatactgctcgcggcggtcgcgctgggcccccat
tgttcctgcgctgcctccacggggaccccacctccacacagactaaaacgatgctggctc
gttaggatgacctttcattcccaagagcatctacaggaacatctcgctgtagacaccgag
ccgaacatgtgggtgacggaaggaaagaaaatacatctcgctagttgccacacggaaaga
ccaatgagttcctctccagtcgccgacacctcaactccacgagaggaccctgaatattcc
gtttttgcccggatggtggaagagatacaaaaagaggtctacaaactcagtttgatatac
atcaagtgtgaagcctggttggcgtgcagacagcctcacggagacgagacggctgatgaa
actatcgcgatatgtaaatatctgtataatgctcctgaaatcacttaccaagaggttcga
cgctgtctgatactggagagtaaatataagaatgaaacgactcctgagccccaaactgtc
cgggaaaagcggtcgtcagaatctcggccagagctggtctacacgttcatcgagcaagct
gtccagccgggggcgcaggtggcgctcaagtgctccgctgtcggagaaccgttccctcgg
ttcagatggtcgctcgacggacagccgatacccgcgcaccttggggctattatcgcggaa
ggcagggagaatggtcccaacggactcagctccagcagcaactatgtgctgtcgaccctc
accctgacgagtgccagggtggagcatggaggaagatatgagtgcagggctaccaacaac
catggaagcgtcgctcatgctgccaggctgaatgtctatggtccgccctacataagggct
atgaatcctgtcaaggctgtcgccggctctgaagtcacgatctggtgcccctactacgga
tttcctattgattcggtgaagtgggagggtggtgctggcgtggaccctcgttaccagcag
atggatggacagctcaccatcacgaacgtggaccggaaccgggacaagggaggctggact
tgctccgtgctcactccaggaggagaacttgccagacgagaggttcaagtgactgtggta
tcaccaccggtgctgtcgccaatagtgttcccaccaggcctgaaatctggagaccgagcc
caactcacctgcaccgtaacatctggagacatgcccgtgtacttctcctggctcaagaac
atgatgccgatatctagttcccttcaggtggatgaaagaggggcagaattttacagcatg
cttttattcaaaagtttgacagctgcccacagtggcatctatacttgtgtcgtgaccaat
accgcaggcaaagctaacatgtctgctgagctcgccattaaagtgccgccatattggcaa
atagagccatctgatactgccgtgctactgaacggttctctcactgtaagttgtgaagca
agaggacatccttcaccctcaatatattggaccaaattttctggtagtacagaaaccacg
ctgggaggagtctcggaccctgtggtactctcaaatggctctctaagattggaatcagca
cgcgctgaacattctggaaaatatcgttgcagagctgacaacggtgtatcacccgctcta
tctaaagtacttacaatacatatcaacgagccagcaagatttgaaacgcaatcagcaaac
gttactgcaaagctgggggataccgtgagattggcatgtgttgctcgcggcgactccccg
cttgcaacggcttggagtcactcaggacgagcgctacctaactccgactaccgaatgagc
atatcagaaactagaagtgcagaaggcttacgaagtgaattggtgatagaacgagctgat
agacgagattcgggagtataccgttgtcaagcatctaatccatatggaaggtctgatcat
ttcgtgcatttggctgttcaagaacctccagaaccaccagcaaacttcagggtcttagag
accacatctcgttcagttcgtctccaatggcgcagaccgtacgatggaaattctccagta
ttaggatacgtggtacagtaccgcaaacacgattcttccaacacagactcttggagagac
gcggatacacataacgtttccgtatctgctcacaacccggactcatattctgagacggaa
agtgcaacaataaccggattagagccagcgacagcgtacttggtgcgagctaggacagtg
actgcacagtttgcgtcagcgcacacgagggctttgttagcgttgacgttgcatgagcca
ccgtcgagagcaccgatcggcttacgagcatcagccccgcgatcctcgaccattgagcta
gcatggcaggctcctccgtcgtcttcttggaatggggagcttctgggttacacggtgtgg
tggtggccgtcagctgacgggactcttgctggaggaactaatgtgggcatggagttcgcg
accgttcgaggtcaaataacaaagtacattatcgaaggtctggaacattatacacggtac
tctgtaagtgtaagagcatttaatagtgctggtgctggaccagccacggctcctgttaat
acgttgacacaagaaagtgtgccatcagaaggacctcgcgcggtgcgatgtcgggccgtt
tcccctcaaagtctaaaggtggaatggtctccaccacccgcgcacgcacatcacggcgct
ttactaggttacaaactactctaccgaccggagcatacggcagagtggttggagtgggaa
gtgcgtggtaacagcgggtccagcacaggagcgggagcggaggtcaagcgagtagcgggg
gttgaaactcttttactagcattgaggcctcattctaattacaccgtgcaagcgctagcg
tacacagcagccggcgatggcgtgcccgctcatcccatacattgtaccacacagcaagac
gttcctgggtcaccagctgcggtcaaagttgtagcaacatcagtcacatccctggcagtt
agttggctaccgccgagcagaccgaatggtcctctgttgtactatacagtattttacaga
gaattgggcagggacaggccaccacaaaccacgactgttcaagttgaagatggcgactct
tttgtcggtctcggaggatcgacagagcttaggtcattatctgaaggcgctacttacgag
gcatgggtgtcggcacactctgctgcaggagaaggtgaaccttctgcaccacaacctgct
actacgacatcaagagctcgagcaagactcctatcgtttggagtgtgggcacgagtgcaa
tgcggtcactccctccgcttggcctgtgcatggcgaggagagccagcgccgcgagctcgc
tggctgcgtggggaccggcccgtcactcatgatccccgcacacatctgacgccacacggg
catctggctatacatgaagtggatgcatcgacaagtggaaactacacatgctcagcgcgg
aacacgtttgggtcagaagaagtgacgtatcgggtggaatgcgcggcgccgccggccgct
cctacgctgagcttggaccacgccgcacacactgacgccaggcttacttggagaaccaca
catcatcccgctgcaccgccacatggcttcacaatctggtgggttcgtgtccgggacgac
actggagatctggagtctatcagcagtcgatcggaggaggagagaagactagagactgga
ggggaggcagctagtgttgtcttgagggccctgtcctgtggagcgagctattctgtacga
gcagtggctcattcgagagctggctcctcgccgccatcagttccgctgatggtcaaaacg
aaacctccagtgctggtatgggaaggcggaggggaagacaggctggaagagggtgctgaa
gcggcagtatggagcaacagcagtgctctagcgttagacgcgcgccgtgcggtgcgctgc
ggggccaggctggtgcgactgcagtggcggcgagctgacgcagccagtgctacagtctgg
agagacgctgacttgacgtcactgcatcatcatcgcgaggtggtgctgggagacctcggt
gctggcgcgtggtatgcgctgcgactgtggaccgctacggaatccgcgcgacaccaagcc
attatttacgctgccaccactacacattccggagaacgcctgcgccgtcccgtggcgttc
caatctgaagggggtcagatcagcacgccgagcgggaacgcggacacggagcgcgtgctc
ggcgccgtctcgctcgcgtttgctgctctcgccgcgctcgccgtcaccgcgttgctgctc
gtgctcgtcgcgaaacgaaccactttatggccatgtggaggggccgacgaagaggcccgg
cgctgcagccactcggtggccagcaccgacaagtccgtgtgccctgaacagcagaacatc
aggaactgccagcacgactacaaacatgacaagctgtcgcctgcctcggacgtgtacgag
ataagtccttacgcaacgttcgcggtgggcggcgaggcggcggcggcaaccctggaccat
acgctacagttccgcacgtttgggcaccgcgacaacgacgcgccaccgcaccggccctgc
agaaagcatccacagcgacaccgggaaagagctgaggtggagaagcacctctcggagtgc
gagctgcagcagctgagccgctacgagaaggtgcgcccgcgacactgtgccccgacctcg
tactgcgtgccgctagcacaccacggcagcggaggcgggagcggtagcgggggtggctgc
ggaagcgggggcgggctctccgaagtgtacgccggcgactcgagcgccgagtccggccct
gggtccctgtccccgcgcacccaccacgagcacagctag
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