Trichoplusia ni (cabbage looper): 113507925
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Entry
113507925 CDS
T05757
Name
(RefSeq) transcription elongation regulator 1 isoform X1
KO
K12824
transcription elongation regulator 1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113507925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tnl03041
]
113507925
Spliceosome [BR:
tnl03041
]
Complex A
U1 snRNP components
U1 related factors
113507925
Complex B
113507925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
113507925
NCBI-ProteinID:
XP_026746675
UniProt:
A0A7E5X0I1
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MEEEYIDSQDSAVNEVVNRNSEVSENLVDSTKDFGDVVGYDEGYEEEEGGNSFRGGRGRG
SFRSRGRGPPPGWMNGPPMRFRGRGYGPGGPPMRGRGFFRGRGGPRGFGPNNGPNFDNNW
GPMGPPPPGMMGGPPPGMMGGPPPFGPPPGMMPPGGPMGPPPNMMGQPPPFGGPPGMPPP
NMPAPELWVETKSEEGKPYYYHSRTRETTWTRPQEGPTCKVILQGEMEAMVTSGGPMPMS
GPQGSMNGPMGGPMSGPMGMMPNGVMSNVMPPGVHSAPPTNNVPPFMTQPPPWVKDGKDK
LSEDGSPVENDDMPPGETAPMGGMGGQGQAANGSMGGFGGGYGYGGYGGGWGGGWASWPP
PLVAQPPPALASAAVPDSTSQLAGGAGAARASPASEPTLIPDSPTPTPTPVAEPVITPEL
VSAAAEWTTHRAPDGRAYYYNAAKQESVWEKPKPIKELEELKAKIAEKNDAEKKSEKKPE
TEEAKIEVIDVEAHAEAVAAAEAARAAAAERAARERAARERPPERARDDKPDKDKDKAKQ
DRSRPISSTPILGTPWCVVWTGDGSVFFYNSAAHSSVWERPAALLARPDVDKAVSQPPAA
LLDLQRKDAAAANSKAGNGELKRAADSSTDDTGADAAKKTKTEEPEKKPAPATTSSLTGG
GTIDVGAAAAVEAEVRAARERGALPHHQRLKAFLHMLHEKDVSAFSTWEKELHKIVFDPR
YLMLNSKERRQVFDQYVRERAEEERKEKKNRLQQKKLAFRALMDDAKLHSKSSFNEFTSK
HGRDERYKGIDKARERETYFNEYLAELRKKEKEEKDKAREQVKTEFIALLKEKGVDRHAR
WIDAKKKIDSDARYKAVESSNLREDYFKEYCKLVKEERKKEKDGKEKKRDRSSGKKEKRE
KERDKEKDKEKDVKKDKKKEKGDEPAQEPEAEDPVAEEMETSDGDALAKEKEARAQASIK
EREREVQKALATSLRDRDKEREYHKRDEAVQHFNALLADLVRNPDLSWRDAKKQLKKDHR
YSLAELLTKDDKERLFMQHTSALASRRRDKLRALLGERGVSCTAHWRDVRDMLAEQPAAP
SYGSAAQMEREFRDYQRDKQSAAKTAMRQLLLETRSITHKSLAAVKENPNALQHVLDALK
HDARYIALEHIAEERQQIITLYLEELDKKGPPPPPTATEPSRRAKQ
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaatacatcgattctcaggactcggcagtgaacgaagtggtgaaccgcaat
agtgaagtgagcgaaaatttggtggacagtaccaaggattttggtgatgtagtgggttat
gatgagggttacgaggaggaggagggcgggaacagcttcagggggggtcggggccgtggc
agcttcagaagtagaggccgcggaccgcctcctggttggatgaacgggcctcctatgagg
ttcagaggtcgcggctacggtcccggtggtcccccgatgcgaggcagaggctttttccga
ggacgcggaggcccacgaggatttggccccaacaacggtcccaacttcgacaataactgg
ggtcctatgggcccgcccccgccaggaatgatgggaggtcccccgcccggaatgatgggt
ggtcccccgccgtttggaccccctcccggtatgatgccccctgggggtcctatgggccct
cctccgaatatgatggggcaacctcctccgttcggaggtccccctggtatgccgccccca
aatatgccggcccccgagttatgggttgagactaaatcagaagaaggaaagccttattac
tatcactccagaacccgagagactacgtggactaggccacaggagggaccaacgtgcaag
gtcattctgcagggtgaaatggaggccatggtgacgtcaggtggtccgatgcccatgtct
ggtccccaagggtccatgaacggtcccatgggcgggcctatgtccggccccatgggtatg
atgccaaacggcgtgatgtcgaacgtcatgccgcccggcgtgcactccgcgccgcccacc
aacaacgtgccaccgtttatgacgcagcccccgccgtgggtaaaggatggtaaagacaag
ttatcagaggacggcagcccagtggagaatgatgacatgcccccgggggagactgctccc
atggggggcatgggcggccagggacaggcggctaatggcagcatgggcgggttcggcggc
ggctacggctacggcggctacggcggcggctggggcggcggctgggccagctggccgccg
ccgctcgtcgcgcagcccccgcccgcgctcgccagcgccgccgtgcccgactccacgtca
cagctggcgggaggggcgggcgccgcgcgcgccagcccggcctccgagcccacgctcatc
cccgactcgcccacgcccacgcccacgcccgtcgctgagcccgtcatcacccccgagctg
gtgtcggccgcggccgagtggacgacgcaccgcgctcccgacggccgcgcgtactactac
aacgcggccaagcaggagagcgtctgggagaagcccaagcccatcaaggagctggaagag
ctgaaagccaaaatagcggagaagaatgacgctgagaagaagagtgaaaagaaaccggaa
acggaagaggcaaagatcgaagtgatagacgtggaggcgcacgcggaggcggtggcggcg
gcggaggcggcgcgcgccgccgcggccgagcgggctgcccgcgagcgcgccgcccgcgag
cgcccgcccgagcgcgcccgcgacgacaagcccgacaaggacaaggacaaggccaagcag
gaccgctcccgccccatctcctccacgcccatcctcggcacgccctggtgcgtggtgtgg
acgggcgacgggtcggtgttcttctacaactcggcggcgcactcgtccgtgtgggagcgg
cccgccgcgctgctggcgcgccccgacgtcgacaaggccgtcagccagccgcccgccgcg
ctgctcgacctgcagcgtaaagacgcggccgctgcgaacagcaaagctggtaacggcgag
ctgaagcgcgccgccgactccagtaccgacgacaccggcgccgacgccgccaagaagacc
aagacggaggaacccgagaagaagcccgcccccgcgacgacgtcgtccctgacgggcggc
ggcaccatcgacgtgggcgcggccgccgccgtggaggccgaggtgcgcgcggcccgcgag
cgcggcgccctcccccaccaccagcgcctcaaggccttcctgcacatgctgcacgagaag
gacgtgtccgccttctccacctgggagaaggagctgcacaagatcgtcttcgacccaaga
tacctcatgctcaactccaaggagaggcggcaggtgttcgaccagtacgtccgcgagcgc
gcggaggaggagcgcaaggagaagaagaaccgcctccagcagaagaagttggctttccgc
gcgctcatggacgacgccaagctgcactccaaatcatcattcaacgagttcacatccaaa
cacgggcgcgacgagcgctacaaaggtatagacaaggcgcgcgagagagagacgtacttc
aacgagtacctcgccgagctgcgcaagaaggagaaggaggagaaggacaaggccagagaa
caggtgaaaaccgagttcattgcgctactcaaggaaaagggggtagacaggcatgcgcgc
tggatcgacgccaagaagaagatcgacagcgacgcgaggtacaaggcggtggagagcagc
aacctcagggaggactacttcaaggagtactgcaagctggttaaagaagagaggaagaag
gagaaggatgggaaggagaagaagcgagatcgcagcagcggcaagaaggagaagcgagag
aaggaaagagacaaggagaaggacaaagagaaggacgtcaagaaggacaaaaagaaggag
aagggagatgaaccagcccaagagcctgaagccgaggatcccgtagccgaggagatggag
accagcgacggggacgccctggccaaggagaaggaggcgcgcgcgcaggcctccatcaag
gaacgggagcgagaggtgcagaaggcgctggcgaccagcctgagggaccgggacaaggag
cgggagtaccataagagggacgaggcggttcagcatttcaacgcccttttagcagattta
gtaagaaacccagacttatcgtggcgggacgcgaagaaacaactcaaaaaggaccacaga
tatagcctagcagaactactcaccaaggatgacaaggagcggctgttcatgcagcacacg
agcgcgctggcgagccgccgccgcgacaagctgcgcgcgctgctcggcgagcgcggggtc
agctgcaccgcgcactggagggacgtgagggacatgctggccgagcagcccgccgcgccc
agctacgggagtgccgcgcagatggagcgcgagtttcgcgactaccagcgcgacaagcag
tccgcagccaagaccgcgatgcggcagctgctgctggagaccaggtccatcacgcacaag
agcctcgccgccgtcaaggagaaccccaacgcgctgcaacatgtcctcgacgccttgaaa
catgatgccaggtacatagccctggagcacatagcggaggagcggcagcagatcatcacg
ctgtacctggaggagctcgacaagaagggcccgccgccgccgcccaccgccaccgagccc
tcgcggcgggccaagcagtga
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