Talpa occidentalis (Iberian mole): 119243459
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Entry
119243459 CDS
T07495
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119243459 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tod03041
]
119243459 (DDX46)
Enzymes [BR:
tod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119243459 (DDX46)
Spliceosome [BR:
tod03041
]
Complex A
U2 snRNP components
U2 related factors
119243459 (DDX46)
Complex B
119243459 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
119243459
NCBI-ProteinID:
XP_037365184
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtctcgacactatcggaagcgatcagcgtcacgagggcgttctggaagt
cggtctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagacggtct
agaagcagagatagagacagaaggagagagcggtctcgtagcagggataaaagaagatct
cggtcaagagacaggaagcgtctgaggcgttccagaagtagagagagagatagaagtcga
gaacgcagaagatctcgaagtcgagacaggagacgctcaaggagtagaagcaggggccgg
cgatcccgctcttccagtcctggtaataaaagcaagaaaactgaaaatagatccaggtcc
aaagagaaaacagatagtggggaaagctctaaagagaagaaaaaagacaaggatgacaag
gaggatgaaaaagaaaaagatgctggtaactttgaccagaataaactagaagaagaaatg
agaaaacgaaaagaaagagtagaaaaatggcgagaagaacaacgcaaaaaggccatggaa
aacataggggaactgaaaaaggaaattgaagagatgaaacaaggcaaaaaatggagttta
gaagatgatgatgatgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatg
gagggtgaagagttagatccattagatgcttacatggaggaagtgaaagaggaagtaaaa
aagtttaacatgagaagtgttaaaggtggtggaggtaatgaaaagaagtctgggccaaca
gtcacaaaagtggtcactgttgtgactaccaaaaaagcagttgtagattctgataagaag
aaaggtgagctcatggagaatgatcaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacagcccttacaggctatcagacaaaacagagaaagcttctagaaccc
gtagatcatggaaaaattgaatatgaaccattcagaaaaaacttttacgttgaagttcca
gaactagcaaaaatgtctcaagaagaggtaaatgtatttcgtttggaaatggagggcatt
acagtcaagggaaaaggttgcccaaaaccaattaaatcttgggtccaatgtggaatttcc
atgaagatcttaaattctctgaaaaagcatggctatgaaaagcccaccccaatccaaacc
caagccattcctgctatcatgtctggacgagatttgattggtattgccaaaacaggaagt
ggaaagaccattgcatttctgttgcccatgtttagacacatcatggatcagaggtcatta
gaagaaggagagggaccaatagccgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttccaagaccttgggacttagagtggtctgtgtttat
ggtggaacaggaatcagtgagcagattgctgaactgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgggtcacaaatctt
cgaagagtgacatatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgtccgtcctgatcgacaaacagttatgttttca
gctactttccccagagctatggaggctttggctcgcagaatcctgagtaaacccattgaa
gtgcaggttggaggcaggagtgtggtttgctctgatgtagaacaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagttacttgagcttctaggccattaccaggaatcagga
tctgtcattatatttgtggataagcaggaacacgctgacggtcttctcaaggatttaatg
agagcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgactttaagaatgggacctgcaaacttctcgtggccacctctgttgctgcc
cgaggtctagatgtgaaacatttgattcttgtagtaaattacagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaacaaaggttatgcatat
acttttatcacagaagatcaagctcgctatgctggtgacataattaaagctcttgaattg
tcagggactgcagtgcctcctgatctagagaaactttggagtgatttcaaagatcagcaa
aaagctgaagggaaaataattaaaaagagtagtggattctctggtaagggattcaagttt
gatgagacagaacaagccttggctaatgagaggaagaagttacagaaagcagcacttggt
cttcaagattcagatgatgaggatgctgcagttgatattgatgagcaaattgaaagcatg
tttaattcaaagaagagagtgaaagatatggcagctcctggaacatctagtgttcctgct
cccacggcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat
gctcagaagaatttgggcattgagtctcaggtagatgttatgcaacaggccaccaatgca
attctcagaggtggcaccattttggctcccacagtatcagcaaaaaccattgcagagcaa
ctcgctgaaaagatcaatgccaagctcaactatgtgcctttggagaaacaagaagaggaa
agacaggatggtggacaaaatgaatctttcaagagatatgaggaagaattagagatcaat
gacttcccacagactgccagatggaaagttacttcgaaggaagcgctgcagagaatcagt
gaatattctgaagccgcaattacaatcagaggaacatatttcccacctggcaaagaaccc
aaagaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcag
aaagcaaaagcagaaatcaccaggctcataaaagaagagctgatccggttgcaaaattcc
tatcaacccacaaacaaaggaagatacaaggtcctataa
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