Talpa occidentalis (Iberian mole): 119245932
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Entry
119245932 CDS
T07495
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03013
Nucleocytoplasmic transport
tod03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119245932 (UPF3B)
03015 mRNA surveillance pathway
119245932 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119245932 (UPF3B)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119245932 (UPF3B)
mRNA cycle factors
P-body specific factors
119245932 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
119245932
NCBI-ProteinID:
XP_037367914
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MKEEKDHRPKEKRVTLLTPPGATGSGSGASGDCPKGDDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRIPEKDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERACGQSCTLPKRPEGELKEEKPKRPEDESSRDYRERDRDYDRDQERMA
RERDRLKRQEEERRRQKERYEKEKAFKRKEEEVKKEKELLRDKGKKPESTESVGGSDKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKPGDSAVERKQESGISHRKEG
GEE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggatcacaggcccaaggagaagcgagtaaccctgttgacgcccccg
ggggccacaggcagcggcagtggagcttcgggggactgccccaagggggatgataaacag
gatcgaaacaaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcagcttcaggaacatcttcagcctatgcctgagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaatcaagaggacattattttgttcagggatcgctttgatggttatgtgttcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagttgggactatcgatgatgatccagaatat
agaaaatttttggaaagttatgctgcagataatgagaaaatgacatctactccagagaca
ctgctcgaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaagaaagacggagg
cgagaaatagaaagaaaaaggcaaagagaagaagaaaggagaaaatggaaagaagaagaa
aaacgaaagagaaaagatatagaaaagctaaagaagatagacagaattccagaaaaggac
aagttaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctgctcaagaagccagaaaaaggagatgaaaaagaactggacaaaagagaaaaa
gcaaaaaaactggacaaagaaaatctgaatgatgaaagagcttgtgggcaaagttgtacc
ttgcccaaacgtcccgaaggtgaacttaaagaagaaaagcctaagagacctgaagatgaa
agcagcagagactacagggagagggaccgggattacgacagagatcaagagcgcatggct
cgcgagagggatagactgaagcggcaggaagaagaacgccgccggcagaaggagcgctat
gagaaagagaaggcttttaaaagaaaggaagaagaagtgaaaaaagagaaagaattactt
cgggataaaggaaagaagcctgaaagtacagagtcagtaggcggctcagacaaaactgaa
aagaaagaggaagtggttaagagagatcgaataagaaacaaggatcgcccagcaatgcag
ctttaccaaccaggagctcgaagccgaaatcgactctgtccccctgatgacagcaccaag
cctggagattcagcggtagaaagaaagcaggaaagtggtattagccataggaaagaagga
ggagaagagtga
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