Talpa occidentalis (Iberian mole): 119259690
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Entry
119259690 CDS
T07495
Symbol
UPF3A
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03013
Nucleocytoplasmic transport
tod03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119259690 (UPF3A)
03015 mRNA surveillance pathway
119259690 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tod03019
]
119259690 (UPF3A)
Messenger RNA biogenesis [BR:
tod03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
119259690 (UPF3A)
mRNA cycle factors
P-body specific factors
119259690 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
119259690
NCBI-ProteinID:
XP_037384549
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MRSDKEGVAGXRAAAAARGLNGREKLAAAEAQLRRESPRREPDAPRAPSPGRGSGADKPR
EEKRTVLSKVVIRRLPPSLTRAQLEEQLRPLPAHDYFEFFAADFSLYPHLYSRAYINFRN
PDDILLFRDRFDGYIFIDSKGLEYPAVVEFAPFQKVARKKPKKKDARTGSIEDDPEYKKF
LETYCVEEEKTSANPETLLGDIEAKTRDLIARRTTPLLEYIKSRRLEKQRMREEKREERR
RRDLEKKRLREEEKRRRREEDRCKRREADRRKKAAEKHVRIKLLKKPEMGEELAPEKAKS
RGEEADAGEGRREPPEGRAPPCPEGPPQELPQRPQDDGGQEPVNVGRGLREEDPEAPHGR
PGEGRGASARREPGRSWRRSEDSLKWGRGPKGSQEHAAPAEAAQRPGREKDEDGPAPRKE
RVGDKDRPAGQLRQPGPCGRACEEGGGAEVESE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcggacaaggagggggtcgcgggcncccgggcggcggctgctgcgcgggggctg
aacgggagggagaagctggcggctgcggaagcccagttgcgccgggagtcgccccggcga
gagcccgacgcgccgcgggccccgtcccccggccgcgggagcggcgcggacaagccccgc
gaggagaagaggacggttctgagcaaggtggtcatccggcgcctgccgcccagcctgacc
cgggcgcagctggaggagcagctccgcccgctgcccgcgcacgactacttcgagttcttc
gcggccgacttcagtctttatcctcatctctactcaagagcatacatcaattttaggaat
cctgatgacatccttctttttagagatcgtttcgatggatacatcttcattgacagcaaa
ggcctggagtaccctgcggtggttgagttcgctccgttccagaaggttgccaggaagaag
ccgaagaagaaggatgccaggacagggagcattgaggacgatccagagtataagaagttt
ctagaaacttactgtgtggaggaagagaaaaccagcgccaatcccgaaaccctcctggga
gacatcgaggcaaagacgagggaccttattgctagaagaaccacacctcttttggagtac
atcaagagcagaagactggagaagcagaggatgcgggaggagaagcgagaggaacggagg
aggagggacttggagaagaaacgcttacgggaagaagaaaaaagaagaagaagagaggag
gacaggtgtaagaggagagaggcggacagacgcaagaaagctgccgagaagcatgtgcgg
atcaagcttcttaagaaaccagagatgggagaggaactagcccctgagaaagccaaaagc
agaggagaggaagctgatgctggggaggggaggcgggagcccccagaaggccgtgccccg
ccgtgccccgagggccccccacaggagctgccgcagaggccacaggatgacggcggccag
gagccggtgaatgtggggaggggacttcgggaagaggaccctgaggccccgcacggccgc
ccaggcgagggcaggggagccagcgcacgccgcgagcccggccggtcctggaggaggagc
gaggacagcctgaagtgggggcgagggccgaaggggagccaggagcacgcagcccctgcg
gaggccgcccagaggcctgggagggagaaggacgaggatggcccggcccccaggaaggag
cgtgtgggggacaaggaccggccagctgggcagctgcgccagccgggaccgtgcggccga
gcctgcgaggagggcggaggggctgaggtggagagcgagtga
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