Thermoleptolyngbya oregonensis: HNI00_03400
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Entry
HNI00_03400 CDS
T09452
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tog
Thermoleptolyngbya oregonensis
Pathway
tog02024
Quorum sensing
tog03060
Protein export
tog03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HNI00_03400 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HNI00_03400 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HNI00_03400 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tog02044
]
HNI00_03400 (ffh)
Enzymes [BR:
tog01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HNI00_03400 (ffh)
Secretion system [BR:
tog02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HNI00_03400 (ffh)
Eukaryotic Sec-SRP protein
HNI00_03400 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
CbiA
ArsA_ATPase
AAA_16
ParA
cobW
nSTAND3
AAA_25
AAA_33
AAA_24
AAA_31
APS_kinase
AAA_30
AAA_17
AAA_28
ATPase
ResIII
PIF1
YqeC
6PF2K
Motif
Other DBs
NCBI-ProteinID:
WOB42314
UniProt:
A0AA96Y2Y5
LinkDB
All DBs
Position
complement(794607..796079)
Genome browser
AA seq
490 aa
AA seq
DB search
MFEALADRLEGAWKKLRGQDKISEANIQEALREVRRALLEADVNLQVVKDFVAEVQEKAL
GAEVISGVRPDQQFIKIVHDQLVEVMGETNVPLAEAEPAPTIVLMAGLQGTGKTTATAKL
ALHLRKQNRSTLLVATDVYRPAAIDQLITLGKQINVPVFELGTDANPVEIARQGVAKARE
DGINTVIIDTAGRLQIDEDMMDELAQIKDTVQPHEVLLVVDAMTGQEAASLTRTFHDRIG
ITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL
TLVEKAQEEVDIAEAEKLQEKILNAQFDFDDFLKQTRLLKAMGSLGGIMKMIPGLNKISS
EQLEQGEVQLKRAEAMINSMTREERKNPDLLSSSPSRRRRIAKGAGYGLDDVSKLVSDFQ
KMRSLMQQMGQGQMPGMGLPGMGGGGLFGGGAPAMGGPRNAPPPGWRGYPGGPPSKKKKK
DKKKKGFGTL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagccctagccgatcgccttgaaggagcctggaaaaaacttcgcggtcaagac
aaaatctccgaagctaatatccaagaggccttgcgcgaagtgcggcgggccctgctggag
gcagacgtaaacctccaggtggtgaaagatttcgtcgcggaggtgcaggaaaaggcgctg
ggggctgaggttatttctggcgttcgtcccgaccagcagttcatcaaaatcgtccatgac
cagcttgtagaggtcatgggagaaaccaacgttcccctcgccgaggcggagcctgcgccg
accatcgtgctgatggcgggtcttcagggtacgggtaaaacgacggctacagcaaagctg
gcgctgcatctccgcaagcagaatcgcagcacgctgctggtggcgacggacgtgtatcgt
cccgctgcgatcgaccagctcattacgctgggtaagcagatcaacgtgcccgtgtttgag
ctaggcacggatgccaacccggtagaaattgctcgacagggcgttgccaaagctagagaa
gacggcatcaacacagtcatcatcgacacggcaggtcgcctgcaaatcgatgaggacatg
atggacgagctagcacagatcaaagacaccgtgcagccccacgaagtgctgctggtggtg
gacgcgatgacagggcaagaggcagcaagcctcacccgcacgtttcacgaccgcatcggc
attacgggcgcaattttgaccaagctagatggcgacacgcggggcggcgcggcgctgtcg
gtacggcagatctcggggcagccgatcaagtttgtgggcgtaggcgaaaaggtggaggcg
ctccagccgttctatcccgatcggatggcatcccgcattttgggtatgggcgacgtgctg
acgctggttgaaaaagcccaggaagaagtcgatatcgccgaagccgaaaagctgcaagag
aaaatcctcaatgcccagtttgactttgacgactttttgaagcagactcgcttgctgaaa
gcaatggggtcgctgggcggcatcatgaaaatgatccccggcctgaacaagatttcgagc
gaacagctagagcagggcgaggtgcagctcaagcgggcagaggcaatgatcaactctatg
acccgcgaggagcgcaaaaacccggatttgctctctagttcccccagccgccgccgccgc
atcgccaagggtgcaggctatggactagacgacgtgagcaagttggtcagcgacttccaa
aagatgcgatcgctcatgcagcaaatgggccagggacagatgccggggatgggactgcca
gggatgggcggtggcggcctctttggtgggggcgctcctgcgatgggcggcccgcgcaac
gccccacctcccggctggcgcggctatcccggcgggccgccctctaagaaaaagaaaaag
gacaagaaaaagaaggggtttggaaccctctag
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