Thalassolituus oleivorans MIL-1: TOL_2681
Help
Entry
TOL_2681 CDS
T02529
Name
(GenBank) DEAD/DEAH box helicase-like protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tol
Thalassolituus oleivorans MIL-1
Pathway
tol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TOL_2681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tol03019
]
TOL_2681
03009 Ribosome biogenesis [BR:
tol03009
]
TOL_2681
Enzymes [BR:
tol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TOL_2681
Messenger RNA biogenesis [BR:
tol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TOL_2681
Ribosome biogenesis [BR:
tol03009
]
Prokaryotic type
rRNA helicases
TOL_2681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
Atrophin-1
AAA_19
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCU73079
UniProt:
M5DU92
LinkDB
All DBs
Position
complement(2819148..2821031)
Genome browser
AA seq
627 aa
AA seq
DB search
MTDTISTGFASLGLPFPILRTLEELGYETPSAIQEHSIPPLLEGKDVLGMAQTGTGKTAA
FALPILARTQADFKSPQVLVLAPTRELAQQVAEAVKTYSRHMPGIEVTAIYGGADYGSQL
RDLKRGPQWVVGTPGRVMDHLRRGTLSLADIKAVVLDEADEMLRMGFIDDVNWILEQTPA
SRQVALFSATMPREIQRVAETHLNNPVQVKIETKTTTNDKIRQRYWFVGGAHKNDALLRI
AETEEFDAMMVFVRTKQATEEVAEFMVSNGFKCSPLNGDIPQAQREKAVERLKAGQLDII
VATDVAARGLDVERISHVINYDIPQDTESYVHRIGRTGRAGRNGEAIVFVRGREKRMLRD
IERATRQPIEEMPLPSAEMVNEKRRVMFQARVLDSLHPEKNKVYREMIEKILSEHPVDAM
DVAAAIARMVQGDKPLFIDEQEDARAQKRAQEQNSRESRDRPERGERRERSGERERGAPR
SKMPASASPMPLKGNPDMAMARYMVGIGYDDGLKPGNLVGAIANEADLESRFIGHIEIFE
NYSVIDLPAGMPEPVMNTLRKARVCGRPLSIKTYKESDIPESTGRSAPPRRAGGSGKPGG
AGGRGKPRSSNDSRGDSRPPQRKRREA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatacaatcagcacaggcttcgcaagcctgggccttccttttcctattcttcgc
actctagaagagttgggttacgaaactccttctgctatccaagaacacagtattccgcca
ttgcttgaaggcaaagacgtactgggtatggcacaaaccggcaccggtaaaacggctgcg
ttcgcattacctatcttggctcgcactcaagccgactttaaaagcccacaagtattggtg
ttagcaccaacgcgtgaactggcgcaacaggtggctgaagccgttaaaacctatagccgt
cacatgccgggcattgaagtaactgctatttatggtggtgccgattacggcagccagcta
cgtgatttgaaacgtggcccacaatgggttgttggtactcctggccgtgtaatggatcac
ttacgtcgcggtacgttgagcttggctgatattaaagccgttgttctagacgaagcggac
gaaatgctgcgcatgggctttatcgacgacgtaaactggattctggaacaaaccccagcc
agccgtcaggttgctttattctctgcgactatgccgcgtgagattcagcgtgttgctgaa
actcacctgaataatccagtacaagtaaaaatcgaaaccaaaacgacgaccaacgataaa
attcgtcagcgttattggtttgtcggtggcgcacataaaaatgatgcgttattgcgtatt
gccgaaaccgaagaatttgacgccatgatggtgttcgtacgtaccaagcaagcaacagaa
gaagttgcagagtttatggtcagtaacggctttaaatgttcaccattaaacggtgatatt
ccacaagcacaacgcgaaaaagcggtagaacgcttaaaagcaggccagttggatattatt
gttgcaactgacgttgccgctcgtggtttggacgttgagcgtatcagccacgttatcaac
tacgatattccacaagataccgaatcctacgttcaccgtattggtcgtactggtcgtgcc
ggtcgtaatggtgaagccattgtcttcgtacgtggccgtgaaaagcgtatgttgcgtgat
atcgaacgtgctactcgtcagcctattgaagaaatgccactaccatcggcagaaatggtt
aacgaaaaacgtcgtgttatgttccaagcacgcgttttagatagcctgcacccagagaaa
aacaaagtgtatcgcgaaatgatcgaaaagatcttgagcgaacacccggtggatgcgatg
gatgttgcagccgcgattgctcgcatggtgcaaggcgataagccattgttcatcgacgaa
caagaagatgcacgtgcacaaaaacgtgcgcaagaacaaaatagccgtgaatcacgcgac
cgcccagaacgtggcgagcgtcgtgagcgcagtggtgaacgcgaacgtggtgctccacgc
agcaaaatgccagccagcgcttcgcctatgccattaaaaggtaaccctgatatggcgatg
gcacgttacatggttggcattggctacgacgatggcttgaagccaggtaaccttgttggc
gctatcgcgaacgaagccgatttagaaagccgttttattggtcacattgaaatttttgaa
aattattctgtgatcgatttaccagcaggtatgccagaaccagtgatgaacaccctgcgt
aaagcacgcgtatgtggtcgtcctttgagcatcaagacttacaaagaaagtgacattcct
gaatcaacaggtcgctctgctccaccgcgtcgtgcgggtggctcaggcaagcctggtggt
gctggcggtcgtggcaagccacgtagcagtaatgattcacgtggtgattcacgtcctccg
cagcgtaagcgtcgcgaagcgtaa
DBGET
integrated database retrieval system
