Tetragenococcus osmophilus: C7K38_09405
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Entry
C7K38_09405 CDS
T05711
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
too
Tetragenococcus osmophilus
Brite
KEGG Orthology (KO) [BR:
too00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
too03019
]
C7K38_09405
03009 Ribosome biogenesis [BR:
too03009
]
C7K38_09405
Enzymes [BR:
too01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C7K38_09405
Messenger RNA biogenesis [BR:
too03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7K38_09405
Ribosome biogenesis [BR:
too03009
]
Prokaryotic type
rRNA helicases
C7K38_09405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Mob_Pre
CMS1
Motif
Other DBs
NCBI-ProteinID:
AYW48561
LinkDB
All DBs
Position
1936597..1937943
Genome browser
AA seq
448 aa
AA seq
DB search
MTFESFMLQDFINQALKENNFTQPTEVQERLIPLIQKGRDVIGQSQTGSGKTHTFLLPLI
DQIEIEKNEVQVVITAPSRELAEQIYQVAKQLVAFAPSEIRIAKFVGGTDKQKQLEQLQH
QQPQLAIGTPGRILDMVNERALLIHKSKAFVVDEADMTLDLGFLPEVDQIAGKFSEDIQM
LVFSATIPEKLRPFLKKYLTRPVIEEIKPKTLLSETIENWLISTKGKDRKQLIYQLLTLG
EPYLAVVFANTKEYVDEITEFLQNQGLKVAKIHGGIASRERKRVMRQIQHLDYQYVVATD
LAARGIDIEGISHVINAELPRDLDFFIHRVGRTGRNQLKGTAITLYDPSDERAIDELEKR
GIVFEPKEIKNGEVVATYDRNRRKKREKTPDELDPETIGYVKKQKKQVKPGYKKKIKQKI
DKNNQEKRKIERRQQQRSAKKQKKNSNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgaatcatttatgttgcaagattttattaatcaagcattaaaagaaaataat
tttacacagcctacagaagttcaagaaagactaattccgctcatccaaaaaggtcgcgac
gttattgggcaatctcaaacaggaagcggtaaaacgcatacttttttacttccattaatt
gatcaaattgaaatagagaaaaacgaagtacaggtcgttattacagctccaagccgagaa
ttagcggaacaaatttatcaagttgctaagcaattggtagcttttgcaccttctgagatc
cgcatagctaaatttgttggaggaacagataaacaaaaacaactagaacaactccagcat
caacagcctcaattagctattggaacacccggacggatacttgatatggtaaacgaaagg
gctcttttaattcataaaagcaaagcgtttgtagttgatgaagctgatatgaccttggac
cttggcttcttaccagaagttgatcaaatcgcaggcaagttttctgaagatatacaaatg
ttagttttttctgctactatcccagaaaagttacgtccttttttgaagaaatatcttact
cgtccagtgattgaagaaattaaacccaaaacattgctttctgaaaccattgaaaattgg
ttaatttccactaaaggaaaagacaggaaacaattaatttatcaattactaacccttggc
gaaccttatctagctgttgtttttgctaacacaaaagagtatgtggatgagattaccgaa
tttttgcaaaatcaaggcttaaaagtagccaaaattcacggaggaattgcttctagagag
cgtaaacgcgtaatgcggcaaattcaacatcttgattatcaatatgtggtagcaacggat
ttagctgctcgcgggatcgacatcgaaggtatcagtcatgtaattaatgctgaactgcct
cgagatttagattttttcattcatcgtgtagggcgcacaggtagaaatcaattaaagggg
acagctattaccttatatgacccaagtgatgaacgagcaattgatgagttggaaaaacga
ggaattgtttttgaacctaaagaaattaaaaatggtgaagtagtagcaacctatgatcgt
aaccgccgtaaaaaaagagaaaaaacgccagatgaattggatcctgaaacaattggctat
gttaaaaagcaaaagaaacaagtaaaacctggttataagaaaaaaattaaacaaaaaatt
gataaaaataatcaggaaaaaaggaaaatagaacggcgccagcaacaacgtagcgccaaa
aagcaaaagaaaaattcaaatctttaa
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