Thermus oshimai: Theos_2277
Help
Entry
Theos_2277 CDS
T02346
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tos
Thermus oshimai
Pathway
tos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Theos_2277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tos03019
]
Theos_2277
03400 DNA repair and recombination proteins [BR:
tos03400
]
Theos_2277
Enzymes [BR:
tos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Theos_2277
Messenger RNA biogenesis [BR:
tos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Theos_2277
DNA repair and recombination proteins [BR:
tos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Theos_2277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C_2
Helicase_C
RNase_T
ResIII
RecQ_Zn_bind
AAA_22
RQC
Motif
Other DBs
NCBI-ProteinID:
AFV77266
UniProt:
K7QWR6
LinkDB
All DBs
Position
pTHEOS01:complement(71691..76841)
Genome browser
AA seq
1716 aa
AA seq
DB search
MLLPPYARYVALDLEATSPDPAAAEILEIAAVDLEGRRFHRYVATAEPLKADHEAFRITG
IPFEEYEGGKVPLGQALAELLDFLQGRPLLGHNLLRYDLPLLVRALRGVGLEPPAAFRDS
LDTLRLAQLLFPTPPEGLAGYRLGDLYAYFTGAPLEGAHRALVDAEATWTVLAGLLGEAP
PPEVAGAWRALGLLEGHLYRALESEEAFKALLEREARVDLLDQEGLPFPSPQALGPDLLP
QRRPAQEEMFRKVGQALREGRRVLLEAPTGTGKTKGYLYPALHLGKTVWVATHTKVLQRQ
ALEELRQVAAKGYGVKAALVKSPRDALCLEALWDLFRDVTEELERERQRAQPTGEGVDEE
VRAAVGLLLHYAHLGGHDLEALPGYWHHQRGFREVRALVGTNPHRCREKCPFFQFCAYQK
LRAHQEEAQVLVTNQAYLLAHFLRERGNGVEVPPSWNPREGEDGDLRNLPSGIPTEAHAS
MRSSEDPPHLVVDEAHHLEDVATEALTLVLDQEELTHLLNRLAHPDPERERGLLRHRRRL
EGLPEEVWKRVRELDKDLLPQVRKALKDYSGLLVDLIKNRGRGDPRYGYRLELGPRWARL
EAWPRVKLAEDRLMEALGALRKALLDAGIPPGNLLFYELQPVLDELKAALDLLWERRRLL
GLAKGEPNPNLVHLSEWDPLTDGWRHLAQPVEVAPALREGLWPRFRSAVLTSATLSVATA
EDPEGFGLLQRTLGLEDAEGVRLPPSLPYEKAHLLIPRHLPEAREGTLPRFQRFLHEELR
TLLRHTHRSLTLFTSLRRMQEAKEALDDLPHLLVPLTRREREDVASLVRRDPALKVAALG
SRSYMEGVDFPALSLVSLERLPFPVPSALLSQRMARLQERGLDPWWDYYLPKAALVFVQA
FGRLIRDDRKGVGDGAFVLWDKKLLNAAYQTLFLQALPLGVHHHYPEDRRGFYDLLAQIL
GLDRDGLPQEELEEETVLLLRRILETDLPPEAKARRIAEEVFGLRLDPERWRKQWEAMAL
ALEGKDLLALLPTGFGKSLAFQIPALLEGAGGGLTLVVSPLVALMKDQADRLLEMGLPVG
AVHSLMSTSEQRGVLEEVRAGRVWLLYVSPERLNRSEEVRKLFLDKHREGKLKRVVFDEA
HCLVEWGFDFRPDYLKALERLGEFPGVPKSFFTATLTPKDRKRLEEAVGLKDHGEVYPET
FHRSNLRFVVDKVHGEPAKFQRLVRALSWLLEGEGSGIVYVTTRFEAERIAWALKRLFPE
LGVEAYHAGLGPLPRREVQERFMEGSTRVVVATTAFGMGVDKPDIRLVVHWRPPLSLEEY
IQQAGRAGRDGKEAYALLLFTKSDWGFLKWMAGLGNGTHAAFARKLIQVLEKEGHLLGYR
EDLYRRLQEEEPGSEEEAEEPLEDEDQEEDEDQEASYQTFRRELGQDNLERLLASLERAG
VLEYTYLPGKALLQAPEGLLESWLSLEERAWLRKAGYRPGVRGTLLDFSRLPLGEAQRLD
ERLYALARRKGVVLYHYREPLLSVRPGANLRAGYMGWAEEQEKLREGARKRLEEVQKYAE
RSFCRAQMLLKHLGEKALPCGVCDVCAQDKGPWEVYPVDPEDLERAYSPLDLLLAFFALA
EEQKGYPYLGRRSTLAALRGKEQVGQSRLHKRYLRHPLFGHLAFFRPKKLEEVFDKALKL
GYLEKKDTHKDHPLYGLTPKGWDRYRRHLRKEVAHG
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgcctccttacgcccgctacgtggccctggacctcgaggccacctcccccgac
cccgccgcggcggagatcctggagatcgccgcggtggacctggaggggcggcgtttccac
cgctacgtggccaccgccgaacccctgaaggccgaccacgaggccttccggatcacgggc
atcccctttgaggagtacgaagggggaaaggtccccctgggccaggccctggcggagctc
ctggacttcctccagggccgccccctcctcgggcacaacctcctgcgctatgaccttccc
ctcctggtgcgggccctgaggggggtgggcctggagcccccagcggccttccgggactcc
ctggacaccctgaggctggcccagctcctttttcccaccccgcccgagggcttggctggc
taccgcctgggggacctctatgcctacttcaccggagcccccctggagggggcccaccgg
gccctggtggacgcggaggccacctggaccgtgctggcagggcttttaggggaagcccct
cctccagaggtggcgggggcctggcgggccctggggcttttggaaggccacctgtaccgc
gcactggagtccgaggaggcctttaaggcgctcctggagagggaggcccgggtggacctc
ctggaccaagaaggccttcccttcccctccccccaggccctgggccccgatctcctgccc
caacggcggcccgcccaggaggagatgttccggaaggtggggcaggccctacgggagggg
cggcgggtgctcctggaagcccccacgggcacggggaagaccaagggctacctgtacccg
gccctccacctggggaagaccgtctgggtggccacccacaccaaggtcctccagcggcag
gccctggaggagcttcgccaggtggccgccaagggctacggggtcaaggccgctctggtg
aaaagcccccgggatgccctctgcctcgaggccctctgggaccttttccgggacgtcacg
gaggagctggagagggagcggcaaagggctcaacccaccggtgaaggggtggacgaggag
gtgagggccgcggtgggcctcctcctccactacgcccacctgggggggcacgacctggag
gccctgcccggctactggcaccaccagcgggggttccgggaggtccgggccctggtgggc
accaacccccaccgctgccgggaaaaatgccccttcttccagttttgcgcctaccagaag
ctccgggcccaccaggaggaagcccaagtcctggtgaccaaccaggcctacctcctggcc
catttcctaagggagcggggaaatggggtggaagtccctccctcgtggaatccccgtgag
ggggaagacggcgacctgcggaacctcccatctgggatccctactgaagcgcacgcttcg
atgcggtcgtcggaagacccgccccacctggtggtggacgaggcccaccacctggaggac
gtggccaccgaggccctgaccctggtcctggaccaggaggagctcacccacctcctaaac
cgcctggcccaccccgaccccgagcgggagcgggggctcttgcggcaccgccgccggctg
gaggggcttcccgaggaggtgtggaagcgggtgcgggagctggacaaagacctcctgccc
caggtgcgcaaggccctgaaggactacagcgggctcctggtggacctcatcaagaaccgg
ggccggggggacccccgctacggctaccggctggagctcgggccccgctgggctcgcctc
gaggcctggccccgggtgaagctggcggaggatcgcctgatggaggccctaggagcgctt
cggaaggcgcttttggatgccgggatccccccggggaacctcctcttctatgagctccaa
ccggtgctggatgagcttaaagccgctctggacctcctctgggagcggcgccggctcctg
ggcctggccaagggggaacccaaccctaacctcgtccacctttccgagtgggaccccctc
acggacgggtggcggcacctggcccagcccgtggaggtggccccggccctgcgggaaggg
ctctggccccgtttcaggagcgcggtgctcaccagcgccaccctcagcgtggccacggcg
gaggaccccgagggctttggcctcctccagcggaccctggggctagaggacgcggaaggg
gtgcgcttgcccccctccctcccctacgagaaggcccacctcctcatcccccgccacctg
cccgaggcccgggagggcaccctgccccgcttccagcgcttcctccacgaggagctccgc
accctcctccggcacacccaccggagcctcaccctcttcaccagcctcaggcggatgcag
gaggctaaggaggccctggacgacctgccccacctcctggtgcccctcacccgccgggaa
cgggaggacgtggccagcctggtgcggcgggacccggccctcaaggtggccgccctgggt
tcccgaagctacatggagggggtggacttcccggcgctgagcctggtgagcctggagcgg
ctcccctttcccgtcccctccgccctcctcagccagcgcatggcccgactccaggagcgg
ggcctggacccctggtgggactactacctgcccaaggcggccctggtcttcgtccaggcc
tttgggcggctcattcgcgatgaccgaaaaggggtaggagacggagcctttgttctctgg
gacaagaagctcctcaacgccgcctaccagacccttttcctccaggccctcccccttggg
gttcaccaccactaccccgaggaccgccggggcttttacgacctcctggcccagatcctg
ggcctggaccgggatggtctgccccaggaggagctggaggaggagacagtcctcctcctc
cgccggatcctggaaaccgacctccccccggaggccaaggcccggcgcatcgcggaggag
gtcttcggccttcgcctggaccctgaacgctggcgcaagcagtgggaggccatggccctg
gccctggaggggaaggacctcctggctctcctccccacgggtttcggcaagagcctggcc
ttccagatccccgccctcctggagggggcggggggcggccttaccctggtggtttccccc
ctggtggccctcatgaaagaccaggcggaccgcctcctggagatgggcctgcccgtgggg
gcggtgcatagcctcatgagcacttcggagcagcggggggtcttggaggaggtgcgcgcg
gggcgggtctggctcctctacgtgagcccggagcgcctgaaccgaagcgaggaggtgcgg
aagctctttctggacaagcaccgggaggggaagctcaagcgggtggtctttgacgaggcc
cactgcttggtggaatggggctttgacttccgccccgattacctcaaggccctggagcgc
ttaggggagttcccgggcgtgcccaagagctttttcaccgccacccttacccccaaggat
cggaagcgcctggaggaagcggtgggccttaaggaccacggcgaggtgtaccccgaaacc
ttccatcggtccaacctccgcttcgtggtggacaaggtccatggggagccggccaagttc
cagcgtctggtccgggccctctcctggctcctggaaggggagggaagcggcatcgtctac
gtcaccacccgctttgaggcggaacggatcgcctgggccctaaagcggcttttccctgag
ctcggggtggaggcctaccacgcaggccttgggccccttccccgccgcgaggttcaggag
cgcttcatggaggggagcacccgggtggtggtggccaccaccgccttcggcatgggggtg
gacaagccggacatccgcctggtggtccactggcgcccccccttgagcctggaggagtac
atccagcaggcaggccgcgcggggcgggatgggaaagaggcctacgcccttctccttttc
accaaaagcgattggggttttttgaagtggatggcgggtctaggcaacggcacccatgcg
gcctttgcccgcaagctgatccaggttctggaaaaggagggccaccttctggggtaccgg
gaggacctctacaggcgccttcaggaagaggaaccaggctccgaggaggaagcggaggag
cccctcgaggacgaagaccaggaagaagacgaagaccaggaggcgtcttaccaaaccttc
cggcgggagctgggccaggacaatctggagcgtctcctggctagcctggagcgggctggg
gttttagagtacacctacctccctggaaaagccctgcttcaggccccggagggccttttg
gagtcctggctttcccttgaggaaagggcctggctccggaaggcggggtaccggcctggc
gtgcgcggcaccctgctggatttttccaggctgcctttgggtgaagctcagcgcttggac
gagcggctgtatgccttggcccggagaaagggcgtggtcctctaccactacagggagccc
ctcctttccgtccggccgggcgcgaacctgcgcgcggggtacatgggttgggcggaagag
caggagaagctccgggagggggctaggaagcgcctggaagaggtccaaaagtatgcggag
cggtctttctgccgggcgcagatgctcctcaagcacctgggggaaaaggccctcccttgc
ggggtctgcgacgtatgcgctcaggacaaggggccgtgggaggtttaccccgtggacccc
gaggacttggagcgggcctattctcccctggacctcctcctggccttctttgccctggca
gaggaacagaaggggtacccctacctgggccggaggagcacccttgcggccctgaggggt
aaggaacaggtgggccaaagccgcttgcataagcgttacctgcgccaccctctctttggc
cacctggccttctttaggcccaagaagctggaagaggtctttgacaaggcgctaaagctc
ggttatctggagaaaaaagacacacataaggatcatcccctttacggccttactcccaag
gggtgggaccgctaccgcaggcaccttaggaaggaggtggcccatggctga
DBGET
integrated database retrieval system
