Theileria orientalis: TOT_010000940
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Entry
TOT_010000940 CDS
T03460
Name
(RefSeq) transcription factor IIH subunit
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
tot
Theileria orientalis
Pathway
tot03022
Basal transcription factors
tot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TOT_010000940
09124 Replication and repair
03420 Nucleotide excision repair
TOT_010000940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tot03021
]
TOT_010000940
03400 DNA repair and recombination proteins [BR:
tot03400
]
TOT_010000940
Transcription machinery [BR:
tot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TOT_010000940
DNA repair and recombination proteins [BR:
tot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TOT_010000940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
HEF_HK
Helicase_C_3
Snf7
Arg_repressor
Motif
Other DBs
NCBI-GeneID:
20713784
NCBI-ProteinID:
XP_009689786
UniProt:
J4D6C1
LinkDB
All DBs
Position
1:join(2223889..2224672,2224847..2225900,2225998..2226064)
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AA seq
634 aa
AA seq
DB search
MSDVVENEQQYEEETEFQSVIEENFFNYLKELDERVWQRLFQVKACLLALFRSLGELEKL
IIYRLLYINQAVSERALRLWMCSHSISDLKNAFTLLQSYKIIQASETTTKEGKQQFRLHP
DFKNGLISLLSNDENYKYSSDLVMLDSLSNQNTSENVNGSQAAEERYTSLTDQGTSQESP
PRKTKAPPKVEDLIKHAKLKLDFILLFLVSPDSRKGTMKVNKISRKIRRLKKQTTETNDL
SKKIENLEKKFNRLSKNAGVINPPKKGAKNSKTGETKMSRQTLSWLLKDVTSQMTSLLVG
YVQNIDNGCLTNIAPINRNTEDSEKSSVELKEVALKAVTESVELLLALSQSKCGDCFSTE
NLTKTQMRLVRLLNELGIVYYKNANRFYIYDLSYIIGKSNINVDLFKEFDVNKTAGNESR
IIVQSNFKVYVYTASPLQISVLSHLCELQARTPNLVVGVLTRESVQSAFKSGITSNEIIR
FLSPMKLSLSYAGTCNSFMDSFANYKIPENVCRQLKMWESERDRIELSPAILFKRWDADF
MPELFQRTVRWAQSKRYDLFFTQWPSDPHSQEFAEWMSKEKYLACKLELKEEIINQIRLI
RTDISNERNKKEESSIVNGKTTTLNKRVIKANGS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgttgttgaaaacgaacaacaatatgaagaggaaacagaatttcaatctgta
attgaggaaaatttcttcaactacctcaaagaattggatgaacgagtgtggcagaggctg
ttccaagtaaaagcatgccttttagcactattcagaagcctgggagagctggaaaaactc
ataatatataggctgttgtatataaatcaggcggtgagcgagagagcgttgaggctgtgg
atgtgctcacactcaatatcggatcttaagaacgcattcacgctcctccagtcgtataag
atcattcaggcgtcggaaacgacgaccaaggagggaaagcagcagttcagattgcacccg
gactttaaaaatggattgataagtctgctctcaaacgacgaaaactataaatactcgtca
gacctggtaatgctggactcactgagtaaccagaacacatcggaaaatgtgaacggatcg
caagctgctgaagaaagatacacctcgttgacagatcaggggacatcgcaggaaagtccg
ccacgtaaaacgaaggcgcccccgaaggtcgaagacctgataaagcacgcgaagcttaag
ctggacttcatacttctttttttagtatcacctgattcaaggaaggggacgatgaaagtt
aataaaatatcaaggaaaatcagaagactgaagaagcagacgacggaaacgaacgacctg
tcgaagaagatagaaaacctggaaaaaaagttcaacaggctctcgaaaaatgcaggagta
atcaatccgccgaagaagggagcaaagaactcaaaaacaggagagacgaaaatgagtagg
cagacgctgagttggttgctgaaggacgtgacgagtcagatgacgtcactgctggtggga
tacgtgcagaacatagacaacggatgcctgacaaacatagcaccaattaacagaaacacg
gaggactcggagaagtcgtcagtggagttgaaggaggtggcactgaaggcagtaacggag
tcagtggagctgctgctggcactatcgcagtcgaagtgtggagactgcttctccacggaa
aacttgacgaagacacagatgaggctggtgaggctgttgaacgagctgggaatagtctac
tacaaaaacgcaaacaggttctacatatacgacctgtcatacattatcggaaagtcaaac
ataaacgtggacctcttcaaggagttcgacgtaaacaaaacggcgggaaacgaaagcagg
atcatcgtgcagagtaacttcaaggtgtacgtgtacacagcgagtccgctgcaaatcagc
gtgctgagtcacctgtgtgagctgcaggcgaggacgccgaacctggtggtgggcgtgctg
acgagagagagcgtgcagtcagccttcaagtcaggaataacgtcaaacgagatcataagg
ttcctgtcgccgatgaagctgagtctgagctacgcagggacctgcaacagcttcatggac
tcgttcgcaaactacaagataccggagaacgtgtgcaggcagctgaagatgtgggagtcg
gaaagagacagaatagagctgagtccagcgatcctgtttaagaggtgggacgcagatttt
atgccagagctcttccagagaacagtgaggtgggcgcagagcaagaggtacgacctgttc
ttcacgcagtggccgtcggacccgcactcgcaggagttcgcggagtggatgagcaaggaa
aagtacctggcgtgcaagctggagctcaaggaggagataattaaccagatcagactgata
agaacggatatatcgaacgaaagaaacaaaaaggaagagagtagcattgtgaatggaaaa
acaactacattgaataaaagggtaattaaagcgaacggtagttaa
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integrated database retrieval system
