Treponema pallidum subsp. pallidum Nichols: TP_0687
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Entry
TP_0687 CDS
T00016
Name
(GenBank) DNA recombinase (recG)
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
tpa
Treponema pallidum subsp. pallidum Nichols
Pathway
tpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TP_0687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpa03400
]
TP_0687
Enzymes [BR:
tpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TP_0687
DNA repair and recombination proteins [BR:
tpa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TP_0687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
RecG_dom3_C
ResIII
AAA_30
ERCC3_RAD25_C
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AAC65656
UniProt:
P96130
LinkDB
All DBs
Position
complement(752821..754881)
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AA seq
686 aa
AA seq
DB search
MLIGEIKEPVSVLKGTGKVVLAQLERLNISTIGDILSYWPRLWEDRTQEQMFSQWTLAHR
LQVRVSVTAHCWFGFGKSKTLKLVVQDGQGCVAELLCFRRNFLHFMFPVGSEAVVYGSFY
EKDGLLESSSFDIEKIDCIEKKILPVYPLTKGLKQMKLRMLICAAMDQWIGTVDSELPKP
ILEKYHLLTKRDVLLSMHTPRTLDDVAKGKHSLIFEEFFSLQMTIGMRSLQKRGRLPLTQ
GESDQQSAIPSVVSELSLLQKKLHRCLPFELTVDQKRVITEITQDLEREEPMARLIQGDV
GSGKTLVAFFSCLKIIEQGGQVALLAPTELLARQHADTAARLLAPIGIRLAFLTGNVKSE
GRAYLLEALVAGEINLVVGTHALFSKSVRYHDLRLVIIDEQHRFGVLQRSALIQKGREGN
PQGKTPHIIMMSATPIPRTLALSVFGDLDISIIKSMPGGRKPVITYIARKTKAEKVYEFV
GNEIEKGRQAYFIYPRIHDIGLTDLKSVQCMYMYLKNYFARYAVAMIHSKMTEEEQQRIM
KYFSEGTVHILVATSVVEVGVDVPNANCIVIEHAERFGLSALHQLRGRVGRGDVQSYCFL
MHGDEMTECAKRRLKIMGSTADGFVIAEEDLKLRGPGDVGDTKNFEQSGYSGFRVADPVR
DYPILQVAREAAFELLRKEKGSSEAR
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgctcattggagaaataaaagagccagtttctgtactgaagggaacagggaaagttgtt
cttgcgcagttggaaaggctaaacattagcactattggagatatcctttcgtactggcct
cgtttgtgggaagatagaacgcaagaacagatgttttcccaatggacgctggcgcataga
ttgcaagtacgagttagtgtcactgcacattgctggtttggatttggcaagagcaagact
ctcaagcttgtggtacaggatggccaaggatgcgtcgctgaattgttatgttttcgccgt
aattttttgcattttatgtttcctgttggaagtgaagcagtcgtgtatggaagtttttat
gaaaaggatgggttgctggaaagtagttcatttgatatcgaaaaaatcgattgtattgaa
aaaaagattttgcctgtctatcccttaaccaaagggttaaaacaaatgaaattaagaatg
ctcatttgtgcagcaatggatcaatggattggcacggttgattctgaattgcccaaacct
attcttgagaaatatcatctactcacaaaacgagacgtattgcttagtatgcatacccca
agaacgctggatgatgttgcgaagggaaaacattctttgatatttgaagaatttttttct
cttcaaatgactatcggtatgcgctctttacagaagcgggggagattgcctcttacacag
ggagaatctgatcagcagtcggctattccgtcagttgtttctgaattatctttgttacag
aagaaacttcaccggtgtttgccatttgagttgacagtggatcagaaaagagtaattaca
gaaattacgcaggatcttgaaagagaagaaccgatggcacggctaattcagggagacgtt
ggatcaggaaaaacgttagtggcgtttttttcttgtttaaaaattattgaacaaggtgga
caggtcgcactgcttgctccaactgaattacttgcacgccagcatgctgacactgcagct
cgattacttgctcctattgggattcgacttgcattcctgacaggtaatgtgaaaagtgaa
ggaagggcgtacttgctcgaagctcttgttgcaggagaaatcaatttagttgtaggaaca
catgcgctgttttcaaagagcgtaagataccatgatctgaggttggttatcattgacgaa
cagcatcgttttggagtgttacagcgttcggccttgattcagaaaggaagggaagggaac
cctcagggaaagactccacacattattatgatgagcgcaactccaattccacgtacgctt
gcactttctgtatttggtgatttagatatttcaataattaaatctatgcctggtggaaga
aaaccagtgattacgtatattgcaagaaagacgaaagcagaaaaggtgtatgagtttgtg
ggaaatgaaatagaaaaaggtaggcaggcatattttatttatccacgtattcatgacata
ggattaaccgatttaaaatcggtgcaatgtatgtatatgtatctaaaaaattattttgca
cgatatgctgttgcgatgattcactcaaaaatgactgaggaagagcagcagcgtatcatg
aagtatttcagcgaaggtaccgtccatatcttggttgctacaagcgttgttgaagtggga
gtggatgtaccaaatgcgaattgtatcgttatagagcacgcggagcgttttggcctctct
gcactacatcaactgcgtggtcgggttggtcggggtgatgtgcagtcgtattgtttctta
atgcatggggacgaaatgactgagtgtgcgaaacgcaggctgaaaattatgggaagtact
gcggatggatttgttatcgccgaagaggatctgaagttacgaggaccaggggatgtggga
gataccaagaactttgagcaatctgggtacagtggatttcgggttgcggatccagtaaga
gattaccctatcctccaagttgcgcgcgaagcggcgttcgaactactgagaaaagaaaag
ggctcatctgaagcacggtag
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