Tympanuchus pallidicinctus (lesser prairie-chicken): 128078403
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Entry
128078403 CDS
T08967
Symbol
BAP1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128078403 (BAP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpai01002
]
128078403 (BAP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128078403 (BAP1)
03036 Chromosome and associated proteins [BR:
tpai03036
]
128078403 (BAP1)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128078403 (BAP1)
Peptidases and inhibitors [BR:
tpai01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
128078403 (BAP1)
Ubiquitin system [BR:
tpai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
128078403 (BAP1)
Chromosome and associated proteins [BR:
tpai03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128078403 (BAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
128078403
NCBI-ProteinID:
XP_052534528
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRR
KVSTLVDETSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCNNVDLGPTLSRMKDFTK
GFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKGRL
FELDGLKVYPIDHGPWADDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRMK
YESKLHILKMNRQTVLEALQQLIRVTQPELIQSQKSQESQSPEEAKPANSKTVAPESTHP
DSTDEPASQGHTTATQSPPTKSKPMTKASASSINGVPPANPNPIVQRLPAFLDNHNYAKS
PMQEEEDLAAGVGRSRVPVRQHQQYSDDEDDYDDDEEEEVRNTNSAIRYKRKGQVKQEHP
AGAADGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTSGGGAAVAIVTHSQPSPTPSNE
STDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGEEDGLLRIDCLRYNRAVR
DLGPIISSGLLHLTEDGVFCPLAAADGGKSSPPSIKPGEEAQVTIKLDEKEGSEASGSKE
KVGLGRTSDHPGGEKYSPKELLALLKCVEAEIANYEACLKEEVEKRKKFKIDDQRRTHNY
DEFICTFISMLAQEGMLASLVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYKAKRQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaataagggttggctggagctggagagcgaccccggtctcttcacactcctggtcgaa
gattttggggtcaaaggggtgcaggttgaagagatttatgatctgcagagcaaatgccag
ggccccgtgtatgggttcatcttcctgttcaagtggattgaggagcgcagatcccgcagg
aaggtctctaccctggtggatgagacgtcggtgatcgacgatgacatcgttaataacatg
ttctttgctcaccagctgatccccaattcctgtgccacccacgccctgctgagcgtcctc
ctgaactgcaacaatgttgacctgggccccacactgagtcgcatgaaggatttcaccaaa
ggattcagccctgagagtaaaggctatgccatcggcaatgcccccgagctggccaaggcc
cacaacagccatgccaggccggagccacggcacttgccagagaaacagaatgggatcagt
gctgtgcgaaccatggaggctttccattttgtcagctatgtccctatcaagggacggctg
tttgagctggatgggctgaaggtttatcccattgaccatgggccctgggctgacgacgag
gaatggacagacaaagccaggagagtgatcatggagcgcatcggcctggccactgcaggg
gagccataccacgacatccgtttcaacctgatggcagtggttcctgatcggaggatgaaa
tatgagtctaagctccatatcctgaagatgaatcgccagactgtgctggaggccctgcag
cagcttatccgagtcactcagcctgagctgatccagtcccagaagtctcaggaatctcaa
tctcctgaagaggcaaagccagccaacagcaagactgtggccccagagagtacccatcca
gacagcactgatgagcctgccagccagggccacaccacagccacgcagagcccacccacc
aaatcaaaaccaatgacaaaggcatcagcgagcagcatcaatggggtgcctccagcaaac
cccaaccccatcgtgcagaggctgccagccttcctggataaccacaactacgccaagtcc
cccatgcaggaggaggaagaccttgcagcaggagtgggtcgcagccgggtcccggtccga
cagcaccagcagtactcagatgatgaggatgactatgatgatgatgaggaggaggaagtt
cgtaacaccaactcagccatcaggtacaaaaggaaggggcaggtaaagcaagagcaccca
gcgggggccgcggatggccagctctccgtcctccagcccaacaccatcaacgtcctggct
gagaagctgaaggagtcccagaaggatctctccattcccctgtccatcaagacgagtggt
ggtggagctgctgtggccattgtcactcactcccagccctctcccacccccagcaatgag
agcacggacaccgcctccgagatcggcagcgccttcaactccccgctgcgctctcccatc
cgctcggccaaccccacgcgtccctccagccccgtcacgtcccacatctccaaggtgctg
tttggtgaggaggacggcctcctgcgcattgactgcctgcgctacaaccgggccgtcagg
gacctggggcccatcatcagctctgggctgctgcatctcacagaggacggcgtgttctgc
ccgctggctgctgcagacggggggaaaagctcccccccttccatcaaacccggtgaagaa
gcccaggtcaccatcaaactggacgagaaggagggcagtgaggccagtggcagcaaagag
aaggtgggacttggcaggaccagtgatcaccctgggggggaaaagtattctcccaaggag
ctgctggcactgctcaagtgtgtggaagccgagattgcaaactacgaggcttgcttgaag
gaggaagttgagaagaggaagaaattcaagatcgacgaccagaggagaacccacaactat
gatgagttcatctgtaccttcatctccatgctggcccaggaaggcatgctggcgagcctc
gtggagcagaacatctccgtccgcaggcggcagggggtcagcatcggccgtctgcacaag
cagaggaagccggatcgccggaaacgctcccgtccatacaaagccaagcggcagtag
DBGET
integrated database retrieval system
