Tympanuchus pallidicinctus (lesser prairie-chicken): 128078883
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Entry
128078883 CDS
T08967
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpai03041
]
128078883 (RBFOX1)
Spliceosome [BR:
tpai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128078883 (RBFOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
RRM_5
Motif
Other DBs
NCBI-GeneID:
128078883
NCBI-ProteinID:
XP_052535473
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MYFFTQRKFKSTDELRKRTAKADVGFAPDRSYLVLALSLEEVGVLLHPYGVPMILPAAPY
FAGLVQGNQEATAPPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPDYTGQTTVPEHTL
NMYPPAQTHSEQSAADTNAQTVSGTATQTEDAAQTDGQQQTQSSENTENKSQPKRLHVSN
IPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEG
RKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGRVLLCQANQEGSPVYSA
PSSLVYTSTMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDG
FYGADIYGGYAAYRYAQPATATAAAYSDSYGRVYAADPYHHTLAPAATYGVGAVNAFAPL
TDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcttcactcaaagaaagttcaaatcaacagatgagttgcgaaagagaacagct
aaggctgatgtgggctttgcccctgacagaagttatttggttctagctctgagtttggaa
gaagttggagttttgctacatccatatggagtgccaatgattctgccggcagcaccatac
ttcgctggacttgttcagggtaatcaggaagctacagcacctcctgacacaatggcacag
ccttatgcctcagcccagtttgctcctcctcagaacggtatacctgcagaatacacagcc
ccacatcctcatccagctccagactacacaggccaaaccactgttccagagcacacatta
aacatgtaccctcctgctcagacacactctgaacagagtgcagctgacacaaatgcacaa
actgtctccggcacagccacacagacagaagatgcagcacagaccgatggtcagcaacag
acgcaatcttctgaaaacacagaaaacaaatcacagccaaaacggcttcacgtctcaaat
ataccattcagattccgtgatccagatcttagacaaatgtttggtcaatttggtaaaatc
ttagatgttgaaattatttttaatgagcgaggctcaaagggatttggtttcgtaactttc
gaaaatagtgctgatgcggacagggcgagggagaaattacacggcaccgtggtagagggc
cgtaaaatcgaggtaaataatgcaacagcacgtgtaatgacaaataaaaagaccgtcaac
ccttacacgaatggctggaaattaaatccagttgttggtgcggtttatagtccagaattc
tatgcaggcagggtgctgctgtgccaggcaaaccaggagggatctcccgtgtacagtgcc
cccagttcactagtatacacatccacaatgccaggatttccctaccctgctgcaactgca
gctgccgcgtacagaggtgcccacctaagaggccgaggtcgcacagtgtacaacacgttt
cgtgcagcagcacccccccctccgattccagcctacggcggtgttgtataccaggatgga
ttttatggtgcagacatttatggtggttatgctgcctaccggtatgcccagcctgccact
gccactgcagctgcctacagtgacagttacggacgagtttatgctgcagacccctaccac
cacacacttgctccagcagccacctacggcgttggtgccgtgaatgcttttgcacccttg
actgatgccaagactaggagccatgctgatgatgtcggtctcgttctttcttcattacag
gctagtatataccgagggggatacagccgttttgctccatactaa
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