Tympanuchus pallidicinctus (lesser prairie-chicken): 128082791
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Entry
128082791 CDS
T08967
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpai01002
]
128082791 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128082791 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpai04147
]
128082791 (USP13)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128082791 (USP13)
Peptidases and inhibitors [BR:
tpai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128082791 (USP13)
Ubiquitin system [BR:
tpai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128082791 (USP13)
Exosome [BR:
tpai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128082791 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
128082791
NCBI-ProteinID:
XP_052543301
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MQRAALFGGGGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYV
CMNTFLGFGREHIERHYRKTGQCVYLHLKRHVIEKVPGASGGALPKRRNAKLFLDLEANG
DLSSDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIASDALLSAKSPYRKQDPDSWEE
ELQASKHAKSLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGH
AMEHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVAENG
LRDNDIKPRVSEWEVIQEAGMKLKPVYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAY
VGNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQQNGI
SPQMFKAFISKDHTEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCC
QSRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRAPPELVRAKIPFSAC
LQAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPQYLVVQIKKFTFGLDWIPKKLDVSID
MPDFLDINHLRAMGLQPGEEELPDIAPPIIIPEDPKDRMMNHFVESLDIDESSVMQLAEM
GFPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVVPVFGGASSSGVAGFGAVEL
DNQPPEEMVSIIISMGFQRSVAIQALKATNSNLERALEWIFSHPELEEEDGESALSMMDL
ENHTNANILAETRSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLKKEGRWVIYNDL
RVCASERPPKDLGYIYFYHRIPS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctatttggcggcggcggcgacgcgcagatggcggccggggacctg
ggcgagctgctggtcccctacatgcccaccatccgcgtgcccaagtccggggaccgggtc
tacaagacggagtgcgccttctcctacgactctcccgattcagaaggaggtctctatgtg
tgcatgaacacgtttctgggatttggaagggaacacattgaaaggcattaccggaaaaca
ggacagtgtgtatatttgcatctgaaacgacatgtgatagagaaggtaccaggggcatct
ggtggagctttaccaaaaaggaggaatgctaagctatttttagatctagaggcaaatggt
gatctgagcagtgatgactttgaatatgaagatgaagcaaaactcgttatatttcctgat
cactatgaaatctcattaccaaacatagaagagttaccagcactggtgacaatagcttct
gatgcacttctcagtgcaaaatcaccctataggaagcaggaccctgactcctgggaagaa
gagctacaggcatctaagcatgctaaatcacttgtgcagttggacaatggtgttagaatt
ccccccagtggttggaagtgctcaaaatgtgatcttcgggagaatctgtggctgaacctg
acagatggttcggtgttgtgcgggaagtggttctttgatggtagtggagggaatggccac
gcaatggagcactacaaggagacgggttatcccctggcagtgaagttgggaaccatcact
cctgatggagcagatgtctattcctttgatgaagaggagccggtgttagatccacatata
gcaaagcatctggcacactttgggattgatatgctgcagatgcaagtggcagagaatggt
ctaagagataatgatataaaaccaagagtctctgaatgggaggtgattcaggaagctggt
atgaaactcaagcccgtgtatggcccggggtataccggcatgaagaacctgggaaatagc
tgctacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcgtat
gtgggaaaccttccgagaatattcgactactccccacttgatccaacacaagatttcaac
acccagatggctaaactgggacatggcctcctttcaggccagtattctaaaccacccatg
aaatctgagcttattgaacaggtgatgaaagaagaacacaagcctcaacaaaatggaata
tctcctcagatgtttaaggcttttataagcaaagaccacacagaattttcctctaataga
cagcaagatgcacaggagtttttcctacatcttataaatctagtagagaggaatcctgta
ggttcagaaaaccccagtgatgttttccgtttcctggtggaagaacgcacgcagtgctgc
cagtccagaaaagtccgctacacggagagggtggactacatcatgcagttacctgttgcc
atggaggcagcaacaaacaaagatgaattaattgcatatgagctgaaaaggcgagaagca
gaagctgcaaggagagctccaccagaacttgtccgtgccaagatcccatttagtgcatgt
ttgcaagccttctctgaaccaagcaatgtagaggacttctggagcagtgccctccaagca
aaatctgcaggagttaagacttctcgttttgcttcgtttcctcagtacttggtggtgcag
ataaagaagttcacctttggccttgactggatacccaaaaagcttgatgtttcaatagat
atgccagatttcctagatatcaaccaccttcgagccatgggtctccagccaggagaagag
gaacttcctgacattgcacctcccatcatcattcctgaagacccaaaagatcgtatgatg
aaccattttgtggagtctctagatattgatgagtcttcggttatgcaactggcagagatg
ggttttcctttggaagcatgtcggaaagctgtgtactatacagggaacctgggtgctgaa
gtggctttcaactggatcattgcacatatggaagagccagactttgctgaaccattggtt
gtacctgtgtttggaggagcttcttccagtggtgtggctggctttggggctgttgaattg
gataatcaacctcctgaagagatggtctccatcatcatttccatgggcttccaaaggagc
gtagcaattcaagctctgaaggcaacaaacagtaacttggagcgtgcactggaatggatc
ttcagccaccctgaattagaggaggaagatggggagtctgctttgagcatgatggatttg
gagaatcatactaatgcgaatatccttgcagagacaagatcagagggacccaggatcaaa
gacgggcctggaaggtatgagctgtttgggttcatcagccacatgggaacatccacaatg
agtggtcactatgtttgccatctcaaaaaagaaggaagatgggtgatctacaatgacctt
agagtctgtgcctcagaacgaccccccaaagacctgggctatatttatttttaccacagg
ataccaagttaa
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