KEGG   Tympanuchus pallidicinctus (lesser prairie-chicken): 128083999
Entry
128083999         CDS       T08967                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
tpai  Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128083999 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpai03041]
    128083999 (SF3A1)
Spliceosome [BR:tpai03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    128083999 (SF3A1)
 Complex B
    128083999 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    128083999 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 128083999
NCBI-ProteinID: XP_052545664
LinkDB
Position
Unknown
AA seq 790 aa
MPAGPVQAGPPAQPAPPAESKPPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVAR
NGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQT
AQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLT
QLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKLKKEAENPKEVLDQV
YYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEE
LGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTDEPSTQLDQDTQVQDMDEGSDDED
ESQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPAS
KMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETA
IGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKE
KIGPSKPNEMPQPPPPSSASNPPPSAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTS
VVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPS
PAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLN
GQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHL
ALKERGGRKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgccggccggtcccgtgcaggccgggcctccggcgcagccagcgcctcccgcggagagc
aaaccgccagaagaggagccaaaagaggaagcagcaccagccaagcctgtggtgggaatt
atttatcctcctcctgaggtcaggaatattgttgacaagactgccagcttcgtagccaga
aatggtccagaatttgaagctcgaattcgtcagaatgaaataaataaccctaagttcaat
ttcttgaatcccaacgatccttaccatgcgtactaccggcacaaagtcagcgagttcaag
gagggcaaagcacaggagccctcagctgctattcccaaggtcatgcaacagcagcaaact
gctcagcagcagcttccacagaaggtgcaggcccaggtgatccaggagacggttgttcca
aaagagccacctccagagtttgaattcatcgcagatccaccctcgatttctgcctttgat
ttggatgtggtgaagctgacagcgcagtttgtggctcggaatgggaggcagttcctgacc
cagctgatgcagaaggagcagaggaactaccagtttgacttccttcgcccgcagcacagc
ctcttcaactacttcacaaagctggttgagcagtacacgaagatcttgatcccaccgaaa
ggcttactcatcaagctcaagaaggaggctgaaaaccccaaagaagtcctggatcaggtg
tattacagagtggagtgggcaaagttccaggagcgagagagaaagaaggaagaggaagag
aaggagaaggaacgtgttgcttatgctcagattgattggcatgactttgtggttgtggaa
acggtggactttcagcccaacgagcaagggaatttcccacctcccaccactccagaagag
ctgggagctcgaatcctcatccaggagcgctatgagaagtttggggaaagtgaggaggta
gagatggaggtggagtcagatgaagaagatgagaaacaagagaaaacagatgagccttcg
actcagctggatcaagacacgcaggtgcaggatatggatgagggctcagatgacgaagat
gaaagtcagaaagttcctcctcctccagaaactccgatgccgccacctcttcctcccaca
ccagatcaggtcatcgtgaggaaagactacgatcccaaagcttcaaaaccgttaccgcct
gccccagctccagacgagtatcttgtttcccccatcactggggagaagattcctgccagt
aaaatgcaagagcacatgaggattggtctgctggatcctcgatggctggagcagcgcgat
cgctccatccgtgaaaagcagagcgatgatgaggtctatgccccaggtttggatatcgaa
agcagcttgaagcagctggcagagcgccgtactgatatctttggtgtggaagaaactgcc
attggtaagaagattggtgaagaggaaattcagaaaccagaggaaaaggtgacctgggat
ggccactcaggcagcatggcccgcacacaacaggctgctcaggccaatattactcttcaa
gagcaaattgaagctatccataaggccaagggactggtgccagaagatgacagcaaggag
aagattggtcccagcaaaccaaatgaaatgccccagccaccccctccttcatcagcatcg
aatccccctccgagtgctcagcctatcacttctgtgcctcgtccacccacaatgcctcct
cctgtccgtgctgctgttgtttctgcagttcctgtcatgcctcgtcccccgatgacctcc
gtggtccgtttacctccaggctctgtcatagccacccccatgccaccaataatccacacc
ccacggatcaacgttgtccccatgcctccatctgctcctcccatcatgagccctcgcccc
cctcccatgatagtaccaacagcatttgttccagcacctcccgtggctccagttccttcc
ccagccccaatgcctcctgttcacccaccaccacctatggaggatgagccagtttcaaag
aaactgaagagtgaggacagcttgattccagaggaggagtttctgcgcaggaacaagggc
ccagtcacagtcaaagtccaggtccccaacatgcaggacaagactgaatggaagctgaat
ggccaagtgctggtgttcactctgccactctcagaccaggtgtctgttataaaggttaag
atccatgaggccacagggatgccagctgggaaacagaagctgcagtatgagggcatcttc
atcaaggattcaaattccctggcttattacaacatgacaagtggctctctgattcacctg
gcactcaaagaaagaggaggcagaaagaaatag

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