Tympanuchus pallidicinctus (lesser prairie-chicken): 128084427
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Entry
128084427 CDS
T08967
Symbol
LRP6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai04150
mTOR signaling pathway
tpai04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128084427 (LRP6)
04150 mTOR signaling pathway
128084427 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tpai04131
]
128084427 (LRP6)
Membrane trafficking [BR:
tpai04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128084427 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
SGL
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
128084427
NCBI-ProteinID:
XP_052546405
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
MGAVLRSLLACSFCSLMQAAPLLLYANRRDLRLVDAANGKENATVIVGGLEDAAAVDFVF
IKGLIYWSDVSEEAIKRTEFNKSGSVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPARGFMYWTDWGEVPKIERAGMDGSSRSIIVNTD
IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGSHRQAVVKGSLPHPFALTLFGDTLYWT
DWNTHSILACSKYSGEDLREIHSNIFSPMDIHAFSQKRQPNATNPCGINNGGCSHLCLMS
PTKPSYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLPLEDIR
HAIAIDFDPLEGYIYWTDDEVRAIRRSFVDGSGSQFVVTAQIAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSD
RIVLVNTSLGWPNGLALDYEESKIYWGDAKTDKIEVMNADGTGRRVLVEDKLPHIFGFTL
LGDYVYWTDWQRRSIERVHKRTAEREIIIDQLPDLMGLKATNVHQIIGTNPCAEDNGGCS
HLCLYRPQGLRCACPIGLELINDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRASMDG
SDRTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLDREIIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVGGFVCGCPAHYSLNSDNRTCSAPTTFLLFSQKNAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPLDKQLYWIDSRQNIIRKAQEDGSQSLTVVTSPVPNQNLDMQPYDLS
IDIYSRYIYWTCEATNVINVTRLDGRPMGVVLKGDQDRPRAIVVNPEKGYMYFTNLQERS
PKIERAALDGTEREVLFFSGLSKPIALAIDSQLGKLFWADSDLRRIESSDLSGANRVVLE
DSNILQPVGLTVFENWLYWIDRQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNVQ
EYRQHPCSQDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPQQFTCFTGE
IDCIPVAWRCDGFTECEDHSDEKNCPVCSDTQFQCESGQCIDSALRCNGEANCQDNSDEK
NCEVLCLTNQFRCASGQCIGKSKKCDHNLDCSDSSDEQGCYTTEEPAPQPNNTIGSIIGV
ILTLFVVGAMYFICQRVLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMS
RGKSVISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRVTAAMAKGYTSDLN
YDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgtcctgcggagcctgctcgcctgcagtttttgttccctgatgcaagctgcc
ccactgttgctgtatgcaaaccgccgtgacctgaggctggtggatgctgccaatgggaag
gagaatgccacagtaattgtgggtggcctcgaagatgcagcggcagtggacttcgtgttc
ataaaggggttgatatactggagtgacgtgagtgaagaagccattaaacgaacagaattc
aataaatctgggagtgtacaaaatgtggtcgtttctggacttttgtcacctgatgggctg
gcatgtgactggctgggagagaaattatattggacagattctgaaacaaatcggattgaa
gtttctaatttagatggatcattgagaaaagtattattttggcaagaattggatcaaccc
agagcgattgccttagatcctgcaagagggttcatgtattggacagactggggagaagtg
ccaaagatagaacgtgctgggatggatggttcaagccgctccattatagtcaacacggac
atttattggccaaatggactcacattggattatgaagaacagaaactttattgggcagat
gctaaactgaatttcatccacaaatcaaatcttgatggaagtcatcggcaagcagtggtt
aaaggctcccttccacatccttttgctttgacgctgtttggggacacattgtactggaca
gactggaacacgcattccatcttggcctgcagcaagtactctggggaggacctgcgtgaa
atacattccaacatcttctcacccatggatatccatgctttcagccagaagaggcagcca
aatgctacaaacccatgtggaattaataatggtggctgctcccacttatgtctgatgtct
cctaccaagccctcttatcagtgtgcatgtcccactggtgtgaaacttcttgagaatgga
aagacctgcaaagatggtgccactgaattgctgcttctagcccgccggacagacttgagg
cgcatttccttagacactccagattttacagacatcgttttgccactggaggacatccgt
catgccatcgccattgactttgatcctctggaagggtacatctattggactgatgatgaa
gttagggccatccgtcgctcatttgttgatgggtcaggtagtcagtttgttgtcacagca
cagattgctcatcctgatggcattgctgtggactgggttgcccgaaatctgtattggact
gacactggcacagaccgtatagaagttacaaggcttaatgggaccatgagaaaaatcttg
atctcggaagacctggaagaacctagagctattgtgctggatcctatggtagggtacatg
tattggacagactggggagaaattccgaagattgagagagcggcactagatggctcagac
aggattgtgctggtgaatacctcacttgggtggccaaatggactggctctggattatgaa
gaaagcaaaatatactggggagatgcaaaaactgacaaaatagaggtgatgaatgctgat
ggaactgggagaagagttcttgtagaggacaaacttcctcacatctttggattcacgtta
ttgggagactatgtttattggacagattggcaaagacgcagcattgaacgtgtgcataag
cggacagcagaaagagaaatcatcatagatcaactgcctgatctaatgggcctcaaagct
actaatgtacaccagataattggtacaaacccttgtgcagaggataatggtggttgcagc
catttgtgcctgtacagaccacaaggccttcgctgcgcttgtcccataggcttggagctc
atcaatgatatgaagacctgcattgtcccagaagctttccttctgttttctcggagagca
gatattagacggatctctttagaaacaaacaacaacaatgttgctattccgcttactgga
gttaaagaagcttcagctctggattttgatgtgacagacaatcgaatttactggactgat
atttcattgaagaccatcagcagagcatttatgaatggcagcgcactggagcatgttgta
gagtttggcttggattaccctgaaggcatggccgtagattggctggggaagaacttgtat
tgggctgatactggaacaaatcgcatcgaagtgtcaaagctggatggccagcatcgccaa
gtgttggtgtggaaagatcttgacagtccccgggcactggcactggatcctgcagagggg
tttatgtattggactgaatggggtggtaaaccgaagattgatagagcttctatggatggc
agtgaccggactactctggtaccaaatgtgggacgtgccaacggcctaactattgattat
gctaaaagacgactgtactggactgaccttgatactaacctgatagaatcctccaacatg
ctaggtcttgaccgtgagattatagctgatgacttgcctcacccatttggcttgactcag
tatcaggattacatttactggacagactggagccggcgtagcattgaacgagccaacaag
acaagtggccagaacagaactatcatccaagggcatttggattatgttatggacatcctg
gtcttccattcctccaggcaggcaggctggaacgagtgtgcctctagcaacggccattgc
tctcatctctgcttagcagtccctgtcggtggttttgtctgtgggtgccctgctcactac
tccctgaactctgacaacaggacttgcagtgctcctacaacctttcttttgttcagtcag
aagaatgcaattaatcgcatggtgatagatgagcagcagagtccagatatcatacttcct
atccatagtctccgaaatgttcgagccattgattatgaccccctggataagcaattgtat
tggattgattcacgacagaatatcattcggaaggcacaggaagatggcagccagagcctc
actgttgtgacaagtccagttcccaatcagaacctagacatgcagccttatgacctgagc
attgacatctacagccgctacatctactggacctgtgaagctactaatgtcatcaacgtg
acacgcttggatgggagacccatgggagtggtgctcaaaggagatcaagatagacccaga
gccattgtggtgaatccagagaaaggatacatgtatttcaccaacctgcaggaaagatct
cctaaaattgagagagcagcactggatggaactgaacgagaggtcctttttttcagtggt
ttgagcaagcctattgccttagctattgacagccagctaggcaagttgttctgggctgat
tcagacctgcggagaattgaaagcagcgacctttcaggtgctaaccgagttgttttggaa
gattccaatatattgcaacctgtgggactaactgtatttgagaactggttgtattggatt
gacagacaacagcagatgattgaaaagattgatatgactggtcgagaaggacgtacaaag
gtccaagctcgtattgcacaactcagtgacattcatgctgtgaaagagcttaacgttcag
gaatacagacagcacccttgttctcaagataatggtggttgctcacacatttgcattgtg
aagggcgatggcaccacacgctgctcttgtccagtccaccttgttttgctgcaggatgag
ctgtcctgtggagaacctccaacatgctcccctcagcaattcacctgtttcacaggtgag
attgactgcatcccggtggcctggcgctgtgatggtttcactgaatgtgaagaccatagt
gatgaaaaaaactgcccagtgtgctcagacacccagtttcagtgtgaaagtggacaatgc
atagacagtgccctccggtgcaatggagaagcaaattgccaggacaactcagatgagaag
aactgcgaagtgctttgtttaaccaatcagttccggtgcgccagcgggcagtgcattggt
aaaagcaagaaatgtgatcacaacctggactgtagtgacagctcagatgagcaaggatgc
tacactacagaggagcctgcgccacagcccaacaacacgataggctccatcattggtgta
atcctcacactttttgtggttggagcaatgtatttcatttgccagagggtgctgtgccca
cgcatgaagggggatggagagacaatgaccaatgactatgtggtacatggaccagcctct
gtacctcttggttatgtgcctcacccaagctctttgtcagggtctcttcctgggatgtct
cgaggaaaatctgtgatcagctccctcagcattatgggagggagcagtgggccgccctat
gacagggcccatgtcactggagcatcttccagtagttcttcaagtactaaaggcacttac
tttcctccaattttgaacccaccaccatcaccagctaccgaacgttcacattatacaatg
gaattcggttattcttcaaacagcccatccactcatagatcttacagctacaggccttac
agctaccgccactttgcacctcccacaacaccctgtagcacggatgtctgtgacagtgac
tatgccccgagccgaagggtcacggccgcgatggccaagggctacaccagtgacttgaac
tatgattcagagcccgtgccaccgcctccgaccccgcgcagccagtacctgtcagcggag
gagaactacgagagctgccccccttccccatacacagagcggagctactctcaccacctc
tacccaccgccgccgtccccctgcacagactcctcatga
DBGET
integrated database retrieval system
