Tympanuchus pallidicinctus (lesser prairie-chicken): 128084956
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Entry
128084956 CDS
T08967
Symbol
USP48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpai01002
]
128084956 (USP48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128084956 (USP48)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128084956 (USP48)
Peptidases and inhibitors [BR:
tpai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128084956 (USP48)
Ubiquitin system [BR:
tpai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128084956 (USP48)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
128084956
NCBI-ProteinID:
XP_052547659
LinkDB
All DBs
Position
Unknown
AA seq
1029 aa
AA seq
DB search
MAPVAPRLQLEKAAWRWTETVPPEAVTQEHVEAAYRVRLEPCQRGACRRNCRGNPNCLVG
IGEHVWLGEIDENSFHNIDDPNCERRKKNAFVGLKNLGATCYVNTFLQMWFLNLEFRQAL
YLCSSNEPKDKDYEPQAVYEHLQYLFALLQNSRRRYIDPSGFVKALGLDTGQQQDAQEFS
KLFMSLLENTLSEQKNPDVQNIVQKQFCGEYVYVTVCNQCGRESRLVSKFYELELNIQGH
KQLTDCLTEFLKEEKLEGDNRYFCETCQSKQNARRKIRLLSLPCTLNLQLMRFVFDRQTG
HKKKLNTYIGFSEVLDMKPFMEQQSGAYVYELSAVLIHRGVSAYSGHYIAHVKDPQTGEW
YKFNDEDTEKMEGKKLQLGIEEDLAEPSKSQTRKPKCGKGTHCSCNAYMLVYRQQIWENS
LTVEVPAFLQELVERDNCKFEEWCSEMAEMRKQSVARGKIKHEEVKELYQRLPAEAGSPY
DFISLEWLQKWLDKSTPPKPIDNTACLCSHGKLHPDKICIMKRISEYVADFFYRRYGGGP
RLNVKALCKDCVVERCRILRLKNQLNEDYKTVTNLLKITVKGSDGFWVGKASLRSWRQLA
LEQLNEQDEEAEHSNGKLSGNAPNKDEANEEKREEEEELNFNEDIVCPHGDLCISENERR
VVSKEAWKKLKQYFPKAPEFPNNKECCSQCKILEREGEENKALHKMMASEQKTSLQNLFH
DKCRPCLGSWPQETDELYIVSQFFVEEWRKFVRRPTRCSPVSSLGNSALLCPHGGLMFTY
ASMTKEDSKLIALIWPSEWERIQKIFVVDHVIKITRTRVAGEPEGALYSSEPQLCPECRE
GLLCQQQRDLREYTQATIYIHKVVDNKKVMKDAAPELNVSSSEAEEEREENKPEGEQDPD
FNQSNGGAKRQKLSHQSYVSYQKQGIRRSTRHRKVRGEKALLVSANQTLKELKIQIMHAF
SVAPFDQNLSINGKILSDDTATLGSLGVIPESVILLKADEPIADYEAMDDVMQVCTPEEG
FKGTGLLGH
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtggcgccgcggctgcagttggagaaggcggcctggcgctggactgagacg
gtgccgcccgaggcagtaacgcaggagcacgtcgaagcggcctaccgcgtcaggctggag
ccctgccagcgcggcgcctgccggaggaactgccgggggaaccccaactgcctggtgggc
attggggagcacgtctggctgggcgagattgacgagaacagcttccacaacatcgatgat
cccaactgcgagcgccgcaagaagaatgcatttgtgggcttaaagaacctcggcgccacg
tgctatgtgaacaccttcttgcagatgtggtttcttaatctggagtttcggcaagccctc
tacttgtgttctagcaatgagcccaaagacaaagactatgagcctcaggccgtttatgag
catcttcagtacttgtttgccttgctgcagaacagcagaaggcgatacatcgatccctct
gggttcgtcaaagcgctgggcttggatacaggccagcagcaggatgcccaggaattttcc
aagcttttcatgtcactgctggaaaatactttatccgaacaaaaaaatccagacgttcaa
aacattgttcagaaacagttctgtggggagtacgtctatgtcacggtctgcaaccagtgt
ggcagggaatccagactcgtgtctaagttttatgagctggagttaaacatccagggacat
aagcagctgacagactgcctaacagagtttcttaaggaagaaaaattagaaggagacaat
cgttatttttgtgaaacgtgtcagagtaagcagaatgccagaaggaagatcaggctgctc
agtcttccctgcacactcaacctgcagctgatgcggttcgtgtttgacagacaaaccgga
cataagaaaaaactgaacacctacattggcttctctgaggtgctcgacatgaagcctttt
atggaacagcaaagtggtgcttatgtatatgaactgagtgctgttctcatacaccgaggt
gtgagtgcatactcagggcattacatcgcccacgtgaaggacccacagacaggagaatgg
tacaaattcaacgacgaagacactgagaagatggagggcaagaaactgcagctggggatt
gaggaagatctagcagagccttcaaaatctcagacccgtaaacctaaatgtgggaaaggg
acgcactgctcatgcaacgcttacatgctggtgtacaggcagcagatctgggagaattca
ctgacggtggaagtgccagccttcctgcaggagctggtggaacgtgacaactgcaagttt
gaggagtggtgcagcgaaatggccgagatgcgcaaacagagcgtggccaggggcaaaatc
aagcacgaagaggtgaaggagctctaccaaaggttacctgctgaagctggttccccgtac
gacttcatctctctggaatggctgcagaagtggctggataagtccacccctcccaaaccc
atagacaacacagcctgcctgtgctcgcacgggaagctgcatcctgacaagatatgcatc
atgaagaggatatctgagtacgtggctgacttcttctataggagatacggcgggggaccc
aggctgaacgtcaaagcactttgcaaggactgtgtggtagaaaggtgtcgaatcctgcgt
ctgaaaaaccagctaaatgaagactacaaaaccgtcaccaacttgctgaagataacagtc
aaggggagcgatgggttttgggttggaaaggcgtccttgcggagctggcgtcagttggct
ctggagcaattaaatgagcaagacgaagaggcagagcacagcaatggaaagctgagtgga
aatgcaccaaacaaagatgaagcaaatgaggagaagagagaggaggaagaagagttaaat
tttaatgaagacattgtttgcccacatggtgacctgtgcatatccgagaacgagaggagg
gtggtgtcgaaggaagcctggaagaagctcaagcaatatttcccaaaggcccctgagttc
ccaaataacaaagagtgctgttcccaatgcaagattttggagcgcgaaggagaagaaaat
aaagcactgcacaagatgatggccagtgagcagaagacgtccctccagaacttgttccac
gacaaatgccggccttgcctgggcagctggccgcaggagacagacgagctgtatattgtt
tcacagttcttcgtagaagaatggaggaaatttgtcaggaggccgacgcggtgcagcccc
gtttcctcgctggggaacagtgctctgctctgcccccatgggggcctcatgttcacctat
gcttccatgaccaaagaagactccaagcttatagctctaatatggcccagcgagtgggag
aggattcaaaagatctttgtggtggatcacgtcatcaaaatcacccgcacacgagtagcc
ggggagcccgagggcgcgctgtacagctccgagccccaactgtgtccagagtgcagagaa
gggctgttgtgccagcagcagcgggacttacgcgagtacacccaagcgaccatctacatc
cataaagtggtggataataaaaaggtaatgaaggatgctgctccggagctgaacgtgagc
agctcagaagctgaagaggaaagggaggaaaacaagccagagggggagcaagacccagat
tttaaccagagcaacggtggtgcgaagcgccagaagctttcacaccagagctacgtctcc
taccaaaagcagggcatccggcggagcacccggcaccggaaggtcaggggggagaaagct
ctgctcgtttctgctaaccaaacattgaaagagctgaaaatacagatcatgcatgcattt
tcagttgctcccttcgaccagaacttgtccatcaatgggaagatcctgagcgacgacaca
gcgacgctcggcagcctgggcgtcatccccgagtccgtcatcctgctcaaggctgatgag
ccaattgcggattatgaggcgatggacgatgtgatgcaagtttgtacgcctgaagaagga
tttaaagggactggcttactcggacactga
DBGET
integrated database retrieval system
