Tympanuchus pallidicinctus (lesser prairie-chicken): 128085469
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Entry
128085469 CDS
T08967
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tpai01002
]
128085469 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpai04121
]
128085469 (USP47)
Enzymes [BR:
tpai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128085469 (USP47)
Peptidases and inhibitors [BR:
tpai01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128085469 (USP47)
Ubiquitin system [BR:
tpai04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128085469 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
128085469
NCBI-ProteinID:
XP_052548897
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MVPSEENQLVPKEDMFWSCRQSTFAELKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERV
TLNVPASTPLKKLFEDVASKVGYENGTFDLVWGNGDNVTDMTPIDQNSDKSILDAGFEPG
KKNFLHLTDKDGEQPHIMQEESGTTEDSAQDRFIGPLPREGSISCTNNYVSQSYSYSSVL
SKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSIF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERIAKVGS
EKNSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLESHEYPDHIKQLVQKERELEEQEKRQR
EIERNTCKIKLFCMHPTKQIMMENKLEVHKDKTLKEAVGIAYKLMDLEDAVPLDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHV
VDLKTESVAPPISVRAYLNQTVSEFKQLISKATHLPAETTRVVLERCYNDLRLLNVPSKT
LKAEGFFRSNKVFIESSESLDRHVAYTDSHLWKLLDRHANTIRLYVSLPEKSPGSQFRQS
VYQKTGADLGNLDEACERVKGPAGNMKCVEAILEESTEKLKSLSLQQQQQEGDNGDSSKS
TEASDFENIESPSNEIDSSASVENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDS
DILSSSHSSDTLCNVDNAPIPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEY
DESGKSRGETQYVYFKSEPYTADEGSGDKQKWLVVHVDKRITLSAFKQQLEPFVGVPSSH
FKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCK
FLLDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEED
INISSNWEVFLEILDGIEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSGVEELKEKL
SELSGIPLENIEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRD
KTEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLIQD
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcgaggagaaccagctcgtccccaaggaggatatgttttggagttgcaga
caaagtacctttgctgaattgaagaagaaattttcacaggtggaaagtgctgctgaggag
cccagagtgctgtgtataatacaagataccacaaattcaaagacagtgaatgaacgcgtt
accttgaatgtgccagcttccacaccacttaaaaagctgtttgaagacgtagcttcaaaa
gtgggctatgagaatggaacctttgatttagtgtggggaaacggagacaacgtaactgat
atgactccaatagatcagaacagtgacaaaagtattcttgatgctggttttgagccaggg
aagaagaactttctgcatttgacagacaaagatggtgagcaacctcatataatgcaggag
gagtcaggtacaacagaagacagtgcccaggacagatttataggtcctcttccgagagag
ggctctattagctgtaccaataactacgtcagtcaaagctactcttactcttcagtcctg
agcaagtcagagacaggttatgtgggtctggtaaaccaagcaatgacttgctatctgaac
agccttttacaaacacttttcatgactcctgaatttagaaatgcattatataaatgggaa
tttgaagaatctgaagaggatcctgtgacaagtatcccataccagcttcaaaggctgttt
gttttactgcagaccagcaagaaaagagcaattgaaacaacagacgttacaaggagtttt
ggatgggatagtagtgaggcgtggcagcaacatgatgtacaggagctttgtagagttatg
tttgatgctttggagcaaaaatggaagcaaacagaacaggccgatcttataaatcagctg
tatcaaggcaaactgaaagactatgtacgatgtctagaatgtggctacgaaggctggaga
atcgacacgtacctggatattcctttggtcatccgtccatatggctccaaccaggcattt
gctagcgtggaagaagcattgcatgctttcattcagcctgagattcttgatggccccaat
cagtatttttgtgagcgatgtaagaagaagtgtgatgcaaggaagggcctgcggttcttg
cattttccatatctgttgacgttacaactgaagagatttgactttgattataccactatg
cacagaattaaactgaatgatcgtatgacttttcctgaggagttagacatgagtatcttc
attgatgttgaagatgagaagtctcctcagactgagagttgcactgatagcggagcagaa
aatgagggcagttgtcacagtgaccagatgagcaatgatttttctaatgatgatggagtt
gatgaaggaatctgcctcgaaagcaacagcgcagcagaaagaattgctaaagtaggcagt
gaaaagaattctttactgtatgaactcttttctgttatggtccattctggaagtgctgct
ggtggccattactatgcctgtataaagtcttttagtgacgaccagtggtacagctttaat
gatcaacatgttagcaagataactcaggaagatattaagaaaacatatggtgggtcttct
ggaagcagaggctattattccagtgcttttgctagctccacaaatgcatatatgctaata
tatagactgaaggatccagcaaggaatgcaaagtttcttgagtcacacgagtatcctgac
catattaagcaattggtgcagaaagagagagaactggaagagcaagagaagaggcagcgg
gaaatagagcgcaacacttgcaagattaaattgttctgtatgcatccaacaaaacagata
atgatggaaaacaaattagaagttcataaggataaaacgctgaaggaggctgtgggaata
gcttacaagctgatggatttagaagacgccgtccctctggattgctgtcgtcttgtcaaa
tacgatgagttccatgactacttggaacgatcttatgaaggagaagaggatacaccaatg
ggtttattgcttggaggcgtcaaatcaacgtacatgtttgacttactgttggaaacaaga
agacctgaccaaattttccagtgctataagcctggtgaggtcatggtaaaagttcacgta
gttgacctgaagactgaatctgttgctcctccaataagtgtacgagcttatttgaatcag
acagtttcagaattcaaacagctaatttcaaaggccacacatctgcctgctgaaacaacg
cgggtggtgttggaacggtgctacaatgatttgcgtcttctgaatgttcccagcaaaacg
ctgaaagctgaaggcttttttagaagcaataaggtatttattgaaagttcagagtcttta
gatcgtcacgtggcatatacagattctcacttatggaaacttctggatcgtcatgcaaat
acaatcaggctgtatgtctcgttaccagagaagtcacctggatctcagtttagacaatcc
gtttatcagaagactggtgcagatttgggcaacttggatgaagcctgtgaaagggtaaaa
ggacctgcaggcaacatgaaatgtgttgaggcaattctggaagaaagcactgagaagctt
aaaagtttgtccctgcagcagcagcaacaggagggtgataatggagacagcagcaaaagc
acagaagccagcgattttgaaaatatcgaatccccttcaaatgaaatagactcttcagca
tcggtagaaaacagagaacttgaaaaccaaattcagatttctgatccagagaatctccag
tctgaggaacggtcggattcagatgtaaataatgacaggagtacgagttcggtggacagc
gatatcctcagttctagtcacagcagtgatactctatgcaatgtggacaatgccccgatt
cccttggctaatggacttgattctcatagtatcacaagtagtaggcgatcaaaagcaaat
caggggaagaaagaaacctgggacacggcagaagaagattctggaacagacagcgaatac
gatgaaagcggcaagagtagaggagaaacacaatatgtgtacttcaagtcagaaccctac
actgcagacgaaggttcaggagataagcagaaatggttggtggtgcacgttgataaaaga
attacactgtctgccttcaagcaacagttggagccttttgttggagttccatcctctcac
ttcaaagtctttagagtttatgccaacaatcaagagtttgagagtgttcggctcaatgag
acactttcatcattttctgatgacaacaagataactattagacttggaagagcccttaag
aagggtgaatacagagtcaaagtctatcagcttttggtaaatgaaccagagccgtgcaag
tttcttctagacgcagtttttgcgaagggaatgaccgtccggcagtccaaagaggagctg
ctccctcagcttcgagaacagtgtggcctggacttaacaattgacaggtttcgtctacgg
aagaaaacctggaagaacccagggactgtgtttctggattatcatatctatgaagaagat
atcaatatttcaagcaattgggaggttttcttagaaatacttgatggaatagagaagatg
aaatccatgtcacaacttgcagttttatcaagacgatggaggccatcagagatgaagcta
gattccttccaggaagtagtgctagaaagcagcggtgttgaggaattaaaagaaaagctg
agtgaattaagcggaatacccttagaaaatattgagtttgcaaagggtagaggaacgttt
ccatgtgacatttctgtcctagagattcatcaagacttggactggaatcctaaagtatcg
acactgaatgtctggcctctgtacatttgtgacgacggtgcagtaatattttatagggat
aaaaccgaagaattaatggaattaacagatgaacagagaaacgaactgatgaaaaaagaa
agcagcagactccagaaaactggacaccgggtaacctactctcctcgtaaagagaaagca
ctaaaaatttatctggatggagcaccaaataaagatttgattcaagactga
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