Tympanuchus pallidicinctus (lesser prairie-chicken): 128089340
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Entry
128089340 CDS
T08967
Symbol
GTF2H2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tpai
Tympanuchus pallidicinctus (lesser prairie-chicken)
Pathway
tpai03022
Basal transcription factors
tpai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128089340 (GTF2H2)
09124 Replication and repair
03420 Nucleotide excision repair
128089340 (GTF2H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpai03021
]
128089340 (GTF2H2)
03400 DNA repair and recombination proteins [BR:
tpai03400
]
128089340 (GTF2H2)
Transcription machinery [BR:
tpai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128089340 (GTF2H2)
DNA repair and recombination proteins [BR:
tpai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128089340 (GTF2H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
128089340
NCBI-ProteinID:
XP_052556590
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEVLKEDESGSLKATIEDILFKAKRKRIYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQMGLIVTKSKRAEKMTEL
SGNSKKHIAALKKAVDMNCQGEPSLYNSLNLAMQTLKHMPGHTSREVLIVFSSLTTCDPA
NIYELIKCLKAVKIRVSVIGLSAEVRVCTVLTRETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSEPCLTLDGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYQGERYCQGCQAEIKDQNVYVC
KTCKNAFCVECDMFIHDSLHCCPGCIHEHPAPVSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcccgagaggactaagcgctgggaaggaggctacgagaggacgtgggaa
gtactgaaggaagatgaatccgggtcgctgaaagcaaccatcgaggacatcctcttcaag
gcgaagaggaaaagaatctacgaacaccatggacaagtccggctgggaatgatgcgtcac
ctttatgtggttgttgatggatcaagaactatggaggaccaagatttaaagccgaacaga
ctgacttgcactttgaagttactggaatattttgttgaagaatacttcgaccaaaatcct
attagtcaaatgggcttaattgtaaccaagagtaaaagagctgagaagatgacagagctt
tcaggtaactcaaaaaagcacatagctgctctgaagaaagcagtggatatgaactgccag
ggagagccatctctgtataattccctaaatttggccatgcagactttaaagcatatgcca
ggacatacaagcagagaggttttaatagtcttcagcagtcttacaacatgcgatccagcc
aacatctatgagctaatcaagtgtttgaaagcagttaagatcagagtgtctgtcattggt
ctaagtgctgaagttcgagtctgtacagtgctgacccgagaaactggaggaacataccac
gttattttagatgaaagtcattataaggaactgctgatgcatcatgttagtcctccacct
gccagctcaagttcggagtgctccctcattcgaatgggttttcctcagcacaccattgct
tccctttctgaccaagatgcaaagccatccttcagcatggcacaactggaaaacaacagt
gagccatgtcttacactggatgggtatttctgtcctcagtgcagagccaaatactgtgaa
cttcctgtggaatgcaagatctgtggtcttacactagtgtctgcacctcatctggctcgg
tcttaccaccacttgtttcctttggatgcctttcaggaaatcccgctggaggaatatcag
ggagaacggtattgtcaaggctgccaagcagaaatcaaagatcaaaatgtttacgtgtgc
aaaacgtgcaagaatgcattttgtgtggagtgtgacatgtttattcatgattccctgcac
tgctgtcctggctgcattcatgagcaccctgctcctgtatctgtatga
DBGET
integrated database retrieval system
