Thrips palmi (melon thrips): 117650760
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Entry
117650760 CDS
T08251
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
tpal
Thrips palmi (melon thrips)
Pathway
tpal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117650760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpal03041
]
117650760
Enzymes [BR:
tpal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117650760
Spliceosome [BR:
tpal03041
]
Complex A
U2 snRNP components
U2 related factors
117650760
Complex B
117650760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
117650760
NCBI-ProteinID:
XP_034250248
UniProt:
A0A6P8ZXW3
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MVRNEHHRKRSRSRSKDRKKRRRTPSPRSRERERERERERERERERERERDRDRERERDR
ERERDRDRYRRSRSRDRKYDKDKDKDKDRSKRNSSSKFKQKPLKDSRSKSRSKSRDRDRK
DKDKTEDSKEDEAYIPANLDKEAEQKRLEEEMRKRRERIELWRAERKKAETAEGVKQIVK
NATAAVNNIVASGRKWNLEDDDDDDDEEKDKKKDPEEKDDTEEVEEKVKVEGEAEEQKEE
EEKKEEIVKEEEDEDEIDPLDAFMMGVQEEVRKVNKQDSKSSGPAPGPVPVKTAGVVIVS
GVAKKRSDKKKGELIEQNQDGLEYSSEEEEENLNETAAILANKQKKELAKVDHSTQEYQP
FRKSFYVEVPEIARMSNEEVEAFKEEMEGIRIKGKGCPRPIRTWAQCGVSKKMLEVLKKN
NYEKPTPIQVQAIPAIMSGRDLIGIAKTGSGKTLAFVLPMLRHIMDQPPLEELDGPIAVI
MSPTRELCMQIGRECKKFTKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDML
AANSGRVTNLKRVTYIVLDEADRMFDMGFEPQVMRIIENVRPDRQTVMFSATFPRQMEAL
ARRILNKPIEIQVGGRSVVCKDVEQHVVILEEEQKFLKLLELLGVYQPQGGVIVFVDKQE
SADELLKDLMKASYHCMSLHGGIDQFDRDSTITDFKSGKVKLLVATSVCARGLDVKNLIL
VVNYDCPNHYEDYVHRVGRTGRAGNKGFAYTFLTPDQERSAGDILRAFELSGVPVPDALR
IMWDRCKARAAAEGKKIHTGGGFSGRGFKFDENEAQGVAERKKFQKAALGLQDSDDEDVE
NDIDQQIESIMAPKRIVKEIKAASLTAGGVPVIPSSGSAPATGPSDKLELAKRLASRIQV
AKNLGADAKVMTQVTAEAILKGAAGGQPLITAKTVAEQLAAKLNTKLNYQPKEEEEEKVK
EEEPETFRKYEEELEINDFPQQARWRVTSKEALAQISEYSEAGITVRGTFYPQGKSPPEN
ERKLFLAIESTNEMAVMKAKTEITRLIKEELMKLQTSGHHGLKSRYKVL
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtaacgagcaccatagaaagcggtctcgaagcaggtctaaggaccgaaagaag
agacgccgtactcctagccctcgttcgcgggaacgagaacgggagagggaacgtgaacgt
gaacgtgagcgcgagagagaaagggaaagagacagagacagggaaagagagcgtgatcgg
gaaagggaaagagacagagacagataccgccgctcgaggagccgtgacagaaaatacgac
aaagacaaggacaaagataaagatagaagtaaacgcaactcttcatctaaatttaagcag
aaaccattgaaagattcacgctctaaatcaagatctaagtccagagaccgggataggaaa
gataaagacaagacagaggatagcaaagaagatgaagcttatatccctgcaaatttggac
aaggaagcggaacaaaagagactagaagaagaaatgagaaagcgccgagagaggattgaa
ctatggcgagctgagcgtaagaaggcagaaacggctgaaggcgtcaaacaaatagtcaaa
aatgctactgctgctgtgaacaatattgtagcatcaggacgaaaatggaatttagaagat
gatgatgatgatgacgatgaagaaaaggataagaaaaaggacccagaagagaaagatgac
acagaggaagtggaagagaaagtaaaggtagaaggggaggcagaggagcaaaaggaggag
gaggagaagaaggaagaaatagttaaggaggaggaagatgaagatgaaattgatcccttg
gacgcattcatgatgggagttcaagaggaagtccgaaaagtcaataaacaggattcgaaa
agctcaggtccagcccctggtcctgtcccagttaaaacagctggtgtagttattgtgtca
ggtgtagccaagaaaagatcagataagaaaaagggagaattgattgaacaaaatcaagat
ggtttggagtattcatcggaagaagaagaagaaaatttaaatgaaactgctgccatttta
gccaacaaacaaaagaaggaactagccaaagttgatcacagtacccaagaatatcaacca
ttccgcaaaagtttttatgttgaggttcctgaaattgctcggatgtctaatgaagaagtg
gaagcttttaaagaggaaatggagggcatccgtatcaaggggaaaggttgtccaagacct
atcaggacttgggctcagtgcggtgtaagtaaaaaaatgttggaggttcttaaaaaaaac
aactatgaaaaaccaactccaattcaagtacaagccatccctgctattatgtcaggtcga
gaccttattggtattgcaaaaactggatctggaaaaactttggcatttgtccttccaatg
ttgaggcacattatggaccagccaccccttgaagagcttgatggtccaattgcggtaatc
atgagtcccacccgtgagctgtgcatgcaaataggccgagagtgtaaaaagttcacaaag
ccactgggtcttcgcgtggtttgcgtgtacggcggtactgggatatcggaacagatagca
gagttgaagagaggggctgagataattgtgtgcacccccggccgcatgattgatatgcta
gctgcaaacagtggtcgagtgactaatttgaaaagagtcacttacattgtactagatgag
gctgatcgaatgtttgacatgggctttgaaccacaagtaatgagaataattgaaaatgtt
aggcctgaccgtcaaactgtcatgttcagtgcaactttccctagacagatggaagccttg
gccagaagaatattgaataaacctattgaaattcaagtgggaggacgcagtgttgtctgc
aaagatgttgaacaacatgttgtaatattggaggaggagcaaaagttcttaaaattatta
gaattacttggtgtctaccagccacaaggtggtgtgatagtgtttgtggacaaacaggaa
agtgctgatgaacttcttaaggatctcatgaaggcctcttatcactgcatgtctctacat
ggtggaattgatcaatttgacagagattccacaattactgattttaaatccggtaaagtg
aaattattggttgcaacttctgtttgtgcccgaggtcttgacgtcaaaaatcttattttg
gttgtaaattatgattgcccaaatcactatgaagattatgtgcatagagttggccggact
ggcagagctggcaacaaaggttttgcctacacttttttaacaccggatcaagaacggtct
gctggtgatattctccgtgcatttgaactgtctggtgtcccagttcctgatgcacttcgt
atcatgtgggataggtgtaaagccagggctgctgctgaggggaaaaagattcatactggt
ggaggcttctcaggccggggcttcaagtttgacgaaaatgaagcccaaggagtggctgaa
cgaaagaaattccagaaagctgctcttggcttacaagattcagatgatgaagacgtggaa
aatgatattgaccagcaaattgaaagtattatggctcccaagcgaattgtcaaagaaatc
aaagctgcatctcttacagcgggtggtgttccagttattccttcctctggttctgcacca
gctactgggccttctgataaacttgagctggcgaagcgattagcttccagaatacaggtt
gcgaagaacttgggcgcggatgcaaaggtcatgacgcaggtcactgctgaagccattctt
aagggagctgctggagggcagcctctcatcacggccaagactgtggctgaacagctagct
gcaaaactaaacaccaaacttaattaccaaccaaaagaagaagaggaagaaaaggtcaaa
gaagaggaacctgaaacatttagaaagtatgaagaagaattggaaatcaatgacttccct
caacaagctcgttggcgggtcacttctaaggaagctttggctcagattagtgagtactca
gaagctggaatcactgttcgtggaacattctatcctcaaggcaaatcacctcctgaaaat
gagcggaaacttttccttgccattgagagtactaatgaaatggctgttatgaaagcaaaa
actgaaatcacgaggttgatcaaggaagagttaatgaagcttcagacatcaggccatcat
ggtttgaaatctcgctacaaagttttatga
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integrated database retrieval system
