Thermofilum pendens: Tpen_0427
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Entry
Tpen_0427 CDS
T00446
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
Organism
tpe
Thermofilum pendens
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
ABL77836
UniProt:
A1RXA6
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Position
387754..389349
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AA seq
531 aa
AA seq
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MALFRELVEAAEAAGRVSGRKEKVRILSEFLGRLSPEEASIAARFLAGHVFPEYDNRELG
VGYSLVREALKVLDQKPLFLVEPQPPAITEVYRLLERIAGVSGEGSREKKLKLLEGLFSR
LSRKEVEYLLRILFGEVRIGASTGLLLEAISRLSGVPYGDVLHAYMVLSDVGDVAFKALE
SPAALGKVDVSLFHPVKPMLADMAYNVDELFQEHGSPLHLEYKYDGLRVQIHMGRGKVRV
FSRRLSDITEYVPDVVERAVEGLHVEEAVVDGEAVAVIGGAPVPFQELLRRVRRKNERED
FLKSLPFELHLFDVIYLNGKSLVREPYSTRSRLLREIVVSEEILAKKTVAYTRQEALEFY
ESAVRSGNEGVMSKRHSSVYKPGIRGSDWLKLKSFDTIDCVIIAAEWGHGRRSGWLSDYH
LGVYDEESGRFLSVGKTFKGLSDAEFEEMTKRLLQLKVREEGYVVYVKPEIVVEVDYSEI
QRSKRYPSGFALRFARIRRIRFDKSPYEVTTLRELRERYLRSIRAKRWSPQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctcttccgagagctcgtcgaagccgccgaagccgctgggagggtttccggcaga
aaggagaaagtacgcattctctcagagttccttgggaggctttccccggaggaggcttcc
attgcggctaggttcctcgcggggcacgtcttccctgaatacgataaccgagaactgggc
gtcggctactcacttgtaagagaagcgctaaaggttctcgatcaaaagcctctttttctc
gtagaacctcaaccacccgcgatcaccgaggtttaccggctactcgagcggattgccggc
gtgagcggtgagggtagcagggaaaagaagctgaagcttcttgaggggctattctcgagg
ttaagcaggaaagaggttgagtacttgcttcgcatactgttcggggaggttaggataggt
gccagcacagggctactcctagaagccatatctaggctatcgggtgtgccgtacggagac
gtgcttcacgcatacatggtgctgagcgacgtgggggacgtcgccttcaaagcactggaa
tcgcctgccgcgcttggaaaggtggacgtatcgctgttccaccctgtcaagccgatgctt
gcagacatggcttacaatgtcgacgagctcttccaggagcatggtagccctctccacctc
gagtacaagtatgacgggctacgcgtacagattcacatggggagggggaaggtcagagtc
ttttcgaggcggctcagcgacataactgagtacgtcccagacgtcgtggagcgcgcggtg
gaggggctacacgtagaggaggcggttgttgacggagaagctgtagccgtaattggcggt
gccccagtccctttccaggagttgttgcgaagggttaggcggaagaacgagagggaagac
ttcctcaaaagcctccccttcgagctccacctcttcgacgtgatataccttaacggaaag
tcgctagtcagagagccttactctactaggagccggctactccgcgagatcgtcgtgtca
gaggaaatcctggcgaagaagaccgtggcgtatacacgccaggaagccttggagttctac
gagtccgctgtaaggagcggtaacgagggggtgatgtctaagcggcactcctcggtgtat
aaacccgggatacgtgggagcgactggctgaagttgaagtccttcgacaccatcgactgc
gtcattatagccgcggagtgggggcacggcaggaggagcgggtggctaagcgactaccac
cttggagtgtacgacgaggagagcgggaggttcctctctgtaggcaaaacgttcaaaggg
ctgagtgatgcggagttcgaagagatgacgaagcggctcttacagctgaaggttagggag
gagggttacgtcgtctacgtgaagcccgagatagtggtggaggtggattacagcgagatt
cagaggagtaagcggtacccctcggggttcgcattgagattcgcgcgcattaggcgtata
cgcttcgataagagcccctacgaggttacaaccttaagggagctcagggaaaggtacttg
cgctccatacgcgcgaagcggtggtctccgcagtga
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