Thermofilum pendens: Tpen_0853
Help
Entry
Tpen_0853 CDS
T00446
Name
(GenBank) Wyosine base formation
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
tpe
Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:
tpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpe03016
]
Tpen_0853
Enzymes [BR:
tpe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
Tpen_0853
Transfer RNA biogenesis [BR:
tpe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
Tpen_0853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
ABL78254
UniProt:
A1RYH4
LinkDB
All DBs
Position
803531..804607
Genome browser
AA seq
358 aa
AA seq
DB search
MSVSPMQEAQRLDVARYLRAGYKLVGNHSAVAVCRWTRSALRGERLCYKSWYGIQSHRCL
QMTPVLNFCDFACKFCWRMHLPGRFKLPPGWRWDEPEDIINGSIVAQRLLLIGFKGNPKV
SRERFLEAMFPRHFTISLDGEPSLYPKLAELVKKVKERNFTAFLVTNGSIPIRLEELVKR
DAQPTNLYLSLYGPNKEVFTATADPRIPNAWENVLRSLELLDRFTESRTVLRLTMVKDLN
MVDPEGYSKLIKLGNPMFVELKGYTWVGESQKRLPISAMPTIEELEKFAKKLEELTGYKV
KVEDDKSRVVMLVRDEDVWERNLKMVEEWRARVAKLDESWRSKVEDFTMEEHGKILYY
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtcaccaatgcaggaggcgcagcgcctagacgtagcgaggtacctcagggct
ggctacaagcttgtaggaaatcacagcgccgttgctgtgtgcaggtggacgaggtctgcg
ttgcgcggtgagaggttatgctacaagagctggtacggcatacagagtcatagatgtctc
cagatgacgcctgtccttaacttctgcgactttgcctgcaagttctgctggagaatgcac
ctaccgggccgcttcaagctcccgccgggttggcggtgggacgagcctgaggacatcata
aacgggagtatcgtggcgcagaggctcctcttgataggcttcaaggggaacccgaaggtg
tcgagggagaggtttctggaggcgatgtttccaaggcatttcacaataagcctggacggc
gagccgtcactctaccccaagcttgccgagctcgtgaagaaggtgaaggagcgtaacttc
acggctttcctcgtaacgaacgggtctatacccataaggctagaggagctcgtgaaaaga
gatgcccagccgacgaacctctacctgagcctttacggaccaaacaaggaggtcttcaca
gcgacagctgacccgaggattccgaacgcctgggagaacgttttgaggagcctcgagctc
ctagacaggttcacggagagcaggactgttctcaggcttacgatggtgaaggatttgaac
atggtagaccccgagggctactcgaagcttattaagctcgggaaccccatgttcgtcgag
ctgaaaggctatacctgggtcggggagagccagaagaggctacctatatcagccatgccg
acaatcgaggagctcgaaaagttcgcaaagaagctggaagagctgacgggctacaaggtg
aaagtggaggacgataaaagccgggtagtaatgctagtgagagacgaggatgtctgggag
aggaacctgaagatggtcgaggagtggcgcgcgagggtcgcaaagcttgacgagtcctgg
cgctccaaggtcgaagacttcacgatggaagagcacggcaagatcctctactactag
DBGET
integrated database retrieval system
