Treponema pedis: TPE_2366
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Entry
TPE_2366 CDS
T02803
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tped
Treponema pedis
Pathway
tped03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tped00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPE_2366 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tped03400
]
TPE_2366 (uvrB)
DNA repair and recombination proteins [BR:
tped03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPE_2366 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TPE_2366 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
Kinesin
Microtub_bd
HPF1
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AGT44840
UniProt:
S5ZWQ8
LinkDB
All DBs
Position
2435648..2437636
Genome browser
AA seq
662 aa
AA seq
DB search
MKRFKLISDYAPSGDQPEAIKQLADGILAGDKFQTLKGVTGSGKTFTMANIIQAVQKPTL
IISHNKTLAAQLYREFKGFFPENAVEYFVSYYDYYQPEAYVPARDLYIEKDASINDEIDR
LRLSATFSLMERRDVIVVSTVSCIYGLGLPESWRDLRITIEKGQTVNIEKFKKQLIGLQY
ERNDAVLERGRFRVKGDVMEIFPAYMEEAYRIEFDWEEIVRIRKFHPISGDVIREYEELS
IYPAKHFVLPENAIPNALERIKKELETRLEVLKAQGKLMEAERLKTRTEYDIEMLSEMGY
CPGIENYSAPIANRQPGEPPATLFHYFPKDFLLFMDESHVTFPQVGAMYEGDRSRKQNLV
DFGFRLPCALDNRPLKIAEFEKMLNQAVFVSATPGPKELDYSVRVVEQLIRPTGLLDPVI
EIHKSEGQMEHIYEEVQKRIGLNERSLILTLTKKMAEDLTDYLTGLGLKVKYIHSEVETI
ERVEILKGLRAGEFDVLIGINLLREGIDLPEVSFIGILDADKIGFLRSATSLIQIVGRAA
RNENGKVIMYADRISDAMKETLAETERRRTIQQAYNTEHNITPKTIKKAVEDILTRENEI
KKEAAIAQAEPIISSFNILNPADRKKLIKKLEAQMAEYADMLMFEEAAILRDKIEEVKRL
SG
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctttaaacttatttccgattatgctccgtcaggcgaccagcctgaggctatt
aaacaattggcggacggtatccttgcaggcgataaatttcaaaccttaaaaggcgttacc
ggttcaggaaaaacatttaccatggcaaatatcattcaggcggtacaaaaacctacgctt
attataagccataataaaacacttgcggcacaactttaccgcgaatttaagggctttttt
cctgaaaatgccgttgagtattttgtatcatattacgattattatcagcccgaagcctac
gtaccggcgcgagacctttacatagaaaaagacgcctcaataaacgatgaaatcgacaga
cttcgtctttcggcgaccttcagtttaatggagaggcgagatgtaatagttgtgtctacg
gtttcctgtatttacggcttgggattgcctgaatcttggcgcgatttgcgcattacaatt
gaaaaggggcaaacggttaatatcgaaaaatttaaaaaacagctcatcggtttacaatac
gagcgcaacgatgccgtattggagcgcggacgctttcgtgttaaaggcgatgttatggaa
atttttcccgcttatatggaagaagcctatcgcatagaattcgattgggaagaaattgta
aggataagaaaatttcaccccataagcggagatgtaatccgggaatacgaagaactgtcg
atttatcctgcaaaacactttgttttacccgaaaatgcaattcccaatgctcttgagcgt
attaaaaaagaattggaaactcggcttgaggttttaaaagcacaaggaaaacttatggaa
gcggaaaggcttaaaacccgtacggaatacgatattgaaatgctttccgaaatgggctat
tgtccaggtatagaaaattattcggctcccattgcaaaccgccaacctggagaacctccg
gcaacgctttttcattattttcctaaggattttttactttttatggacgaaagccacgta
acctttccgcaagtgggagcaatgtatgaaggcgaccgcagcagaaaacaaaaccttgta
gacttcggcttccgtcttccatgcgccttggataaccgacccttaaaaattgcggagttt
gaaaaaatgcttaaccaggcagtctttgtttccgcaacgcctggcccgaaagagcttgat
tattccgtacgcgtagtggaacaacttatacgccccacaggtcttttagacccggtaatc
gagattcacaaaagtgaaggccaaatggagcatatttacgaagaagttcaaaaacgtatc
ggcttaaacgagagaagtttaattttaactcttacaaagaaaatggcggaagacctgacc
gattatcttacagggctaggacttaaagtaaaatatatccacagcgaggtggaaacaatt
gaacgggttgaaattttaaaaggccttcgtgcgggggaatttgacgtccttataggaatt
aatcttttacgcgaaggaatagacttacctgaagtttcatttatcggaatccttgatgcc
gataaaataggctttttacgctccgctacaagtcttattcagattgtaggacgcgccgca
cgaaacgaaaacggaaaggtaattatgtatgccgaccgcataagcgatgcaatgaaagaa
acccttgcggaaacggaacgccgccgcacgattcagcaggcatataataccgaacataat
ataacgccgaaaacgattaaaaaggcggtagaagatattttaactcgtgaaaacgaaata
aaaaaagaagcggcgattgctcaggcggaacccattatttcaagttttaatatactcaat
cctgccgaccgcaaaaaactcattaaaaaactcgaagctcaaatggccgaatatgccgat
atgctgatgtttgaagaagcggcgattctccgcgataaaatcgaagaagtaaaaaggtta
agcggatag
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